BLASTX nr result

ID: Coptis21_contig00040943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040943
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
emb|CAN64926.1| hypothetical protein VITISV_025807 [Vitis vinifera]   115   5e-24
emb|CBI39437.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 hom...   114   6e-24
emb|CAN76831.1| hypothetical protein VITISV_017321 [Vitis vinifera]   112   4e-23

>ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|222844623|gb|EEE82170.1|
           predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/71 (76%), Positives = 64/71 (90%)
 Frame = +1

Query: 1   GICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPARSDL 180
           GIC++ISS AE L+WR +RLFFLNG+QDLSAFLLVDLG++KYP Y+CI+S  IF ARSDL
Sbjct: 573 GICIKISSKAESLIWRTERLFFLNGEQDLSAFLLVDLGIIKYPAYHCIISEQIFSARSDL 632

Query: 181 LAYEEAIEVAQ 213
           +AYEEAIEVAQ
Sbjct: 633 IAYEEAIEVAQ 643


>emb|CAN64926.1| hypothetical protein VITISV_025807 [Vitis vinifera]
          Length = 1989

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = +1

Query: 1    GICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPARSDL 180
            G CVRISS AE ++WR  RLFFLNG+QDL AFLLVDLG+VKYP YNCI S+HIFP  +DL
Sbjct: 1704 GTCVRISSKAESIIWRALRLFFLNGEQDLPAFLLVDLGIVKYPTYNCINSDHIFPGLNDL 1763

Query: 181  LAYEEAIEVAQ 213
            LAYEEAIEVAQ
Sbjct: 1764 LAYEEAIEVAQ 1774


>emb|CBI39437.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = +1

Query: 1   GICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPARSDL 180
           G CVRIS  AE L+WR  RLFFLNG+QDLSAFLLVDLG+VKYP YNCI+S+ IFP  +DL
Sbjct: 496 GTCVRISCKAESLVWRALRLFFLNGEQDLSAFLLVDLGIVKYPTYNCIISDQIFPGLNDL 555

Query: 181 LAYEEAIEVAQ 213
           LAYEEAIEVAQ
Sbjct: 556 LAYEEAIEVAQ 566


>ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]
          Length = 955

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = +1

Query: 1   GICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPARSDL 180
           G CVRIS  AE L+WR  RLFFLNG+QDLSAFLLVDLG+VKYP YNCI+S+ IFP  +DL
Sbjct: 500 GTCVRISCKAESLVWRALRLFFLNGEQDLSAFLLVDLGIVKYPTYNCIISDQIFPGLNDL 559

Query: 181 LAYEEAIEVAQ 213
           LAYEEAIEVAQ
Sbjct: 560 LAYEEAIEVAQ 570


>emb|CAN76831.1| hypothetical protein VITISV_017321 [Vitis vinifera]
          Length = 882

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/71 (76%), Positives = 60/71 (84%)
 Frame = +1

Query: 1   GICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPARSDL 180
           G CVRISS AE ++WR  RLFFLNG+QDL AFLLVDLG+VKYP YNCI S+HIF   +DL
Sbjct: 539 GTCVRISSKAESIIWRALRLFFLNGEQDLPAFLLVDLGIVKYPTYNCINSDHIFSGLNDL 598

Query: 181 LAYEEAIEVAQ 213
           LAYEEAIEVAQ
Sbjct: 599 LAYEEAIEVAQ 609


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