BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040941
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]    72   6e-11
ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. l...    69   3e-10
emb|CBI15512.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|NP_198856.2| pentatricopeptide repeat-containing protein [Ar...    67   2e-09
ref|XP_002324003.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
 Frame = +3

Query: 12  FPFFPQIILKFSTSSLQTITLSNPSPKPNPLYNLLPQTQNPNKIVNLICSHLK--HSQLT 185
           F F P+     S+SSLQT+  S  +   N LY+LLPQTQNPN IVNLICS+LK  +S L 
Sbjct: 71  FIFIPKFPYSSSSSSLQTLNQSQTNSISNSLYHLLPQTQNPNNIVNLICSNLKQHNSNLA 130

Query: 186 SLDFK-KQVVPHLGSDEITR 242
            L  +   ++PHLG+ EI+R
Sbjct: 131 LLHTEVNALLPHLGAQEISR 150


>ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316545|gb|EFH46968.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 608

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
 Frame = +3

Query: 42  FSTSSLQTITLSNPSPKPNPLYNLLPQTQNPNKIVNLICSHLKHSQLTSL-----DFKKQ 206
           FS+SS+     + P P  NPLYNLLPQTQNPNKIV++ICS L H   + L     D  K 
Sbjct: 11  FSSSSIVPRCNNIPKPILNPLYNLLPQTQNPNKIVDVICSTLNHRDHSVLLPNLRDEVKS 70

Query: 207 VVPHLGSDEITR 242
           ++PHLG  EI+R
Sbjct: 71  LIPHLGYPEISR 82


>emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
 Frame = +3

Query: 45  STSSLQTITLSNPSPKPNPLYNLLPQTQNPNKIVNLICSHLK--HSQLTSLDFK-KQVVP 215
           S+SSLQT+  S  +   N LY+LLPQTQNPN IVNLICS+LK  +S L  L  +   ++P
Sbjct: 37  SSSSLQTLNQSQTNSISNSLYHLLPQTQNPNNIVNLICSNLKQHNSNLALLHTEVNALLP 96

Query: 216 HLGSDEITR 242
           HLG+ EI+R
Sbjct: 97  HLGAQEISR 105


>ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g40400 gi|10178151|dbj|BAB11596.1| salt-inducible
           protein-like [Arabidopsis thaliana]
           gi|110742507|dbj|BAE99171.1| hypothetical protein
           [Arabidopsis thaliana] gi|332007160|gb|AED94543.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 610

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
 Frame = +3

Query: 42  FSTSSLQTITLSNPSPKP--NPLYNLLPQTQNPNKIVNLICSHLKHSQLTSL-----DFK 200
           FS+ S   +   +  PKP  NPLYNLLPQ+QNP+KIV++ICS L HS  + L     D  
Sbjct: 11  FSSYSSSIVPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEV 70

Query: 201 KQVVPHLGSDEITR 242
           K ++PHLG  EI+R
Sbjct: 71  KSLIPHLGYPEISR 84


>ref|XP_002324003.1| predicted protein [Populus trichocarpa] gi|222867005|gb|EEF04136.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
 Frame = +3

Query: 45  STSSLQTITLSNPSPKPNPLYNLLPQTQNPNKIVNLICSHLK--HSQLTSL--DFKKQVV 212
           S+SSLQTI  SN     NPLY+ LP+ QNPN  VNLI S LK  ++QLT L  D  K ++
Sbjct: 32  SSSSLQTIQNSNSISLSNPLYSFLPENQNPNNFVNLIYSSLKRDNTQLTLLQNDDIKGLI 91

Query: 213 PHLGSDEITR 242
            HLG++EI+R
Sbjct: 92  HHLGANEISR 101