BLASTX nr result

ID: Coptis21_contig00040928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040928
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509570.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
gb|AFK34152.1| unknown [Lotus japonicus]                               67   2e-09
ref|XP_002884262.1| hypothetical protein ARALYDRAFT_896070 [Arab...    65   4e-09
ref|NP_566150.1| Mitochondrial ribosomal protein L37 [Arabidopsi...    65   6e-09
ref|XP_003620189.1| hypothetical protein MTR_6g078300 [Medicago ...    65   6e-09

>ref|XP_002509570.1| conserved hypothetical protein [Ricinus communis]
           gi|223549469|gb|EEF50957.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 130

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = -2

Query: 320 LRRKNIETLPYEHLKRFVKLDNRSRIKENNSIKAKN 213
           LRRKNIETLPYE LKRFVKLDNR+ IKENNS+KAKN
Sbjct: 95  LRRKNIETLPYEDLKRFVKLDNRASIKENNSVKAKN 130


>gb|AFK34152.1| unknown [Lotus japonicus]
          Length = 131

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -2

Query: 320 LRRKNIETLPYEHLKRFVKLDNRSRIKENNSIKAKN 213
           LRRKNIETL YE+LKR+VKLDNR+RIKENNS+KAKN
Sbjct: 96  LRRKNIETLSYEYLKRYVKLDNRARIKENNSLKAKN 131


>ref|XP_002884262.1| hypothetical protein ARALYDRAFT_896070 [Arabidopsis lyrata subsp.
           lyrata] gi|297330102|gb|EFH60521.1| hypothetical protein
           ARALYDRAFT_896070 [Arabidopsis lyrata subsp. lyrata]
          Length = 125

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = -2

Query: 320 LRRKNIETLPYEHLKRFVKLDNRSRIKENNSIKAKN 213
           LRRKN+ETLPY+ LKRFVKLD R++IKENNSIKAKN
Sbjct: 90  LRRKNVETLPYDDLKRFVKLDTRAKIKENNSIKAKN 125


>ref|NP_566150.1| Mitochondrial ribosomal protein L37 [Arabidopsis thaliana]
           gi|6016731|gb|AAF01557.1|AC009325_27 unknown protein
           [Arabidopsis thaliana]
           gi|6091718|gb|AAF03430.1|AC010797_6 unknown protein
           [Arabidopsis thaliana] gi|21592342|gb|AAM64293.1|
           unknown [Arabidopsis thaliana]
           gi|28393066|gb|AAO41967.1| unknown protein [Arabidopsis
           thaliana] gi|28827392|gb|AAO50540.1| unknown protein
           [Arabidopsis thaliana] gi|332640188|gb|AEE73709.1|
           Mitochondrial ribosomal protein L37 [Arabidopsis
           thaliana]
          Length = 126

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = -2

Query: 320 LRRKNIETLPYEHLKRFVKLDNRSRIKENNSIKAKN 213
           LRRKN+ETLPY+ LKRFVKLD R +IKENNSIKAKN
Sbjct: 91  LRRKNVETLPYDDLKRFVKLDTRGKIKENNSIKAKN 126


>ref|XP_003620189.1| hypothetical protein MTR_6g078300 [Medicago truncatula]
           gi|217069986|gb|ACJ83353.1| unknown [Medicago
           truncatula] gi|355495204|gb|AES76407.1| hypothetical
           protein MTR_6g078300 [Medicago truncatula]
           gi|388518995|gb|AFK47559.1| unknown [Medicago
           truncatula]
          Length = 131

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = -2

Query: 320 LRRKNIETLPYEHLKRFVKLDNRSRIKENNSIKAKN 213
           LRRK I+TLPYE LKR+VKLDNR+RIKENNS+KAKN
Sbjct: 96  LRRKEIDTLPYEDLKRYVKLDNRARIKENNSLKAKN 131


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