BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040909
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera]    66   3e-09
ref|XP_002306238.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    58   9e-07
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07

>ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera] gi|296088567|emb|CBI37558.3| unnamed
           protein product [Vitis vinifera]
          Length = 492

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/55 (50%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +3

Query: 3   RMRELGLVKNPGCSWVSIEGKVRIFYQGDITHTWSNIVYEILDGLVR-TMMPDGY 164
           +MRELGLVK PGCSW+++ G+V  FYQ D++H  + ++YE L G+V   M+P G+
Sbjct: 437 KMRELGLVKTPGCSWITVAGRVHKFYQEDLSHPETQMIYETLHGIVNILMLPKGW 491


>emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera]
          Length = 880

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/55 (50%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +3

Query: 3   RMRELGLVKNPGCSWVSIEGKVRIFYQGDITHTWSNIVYEILDGLVR-TMMPDGY 164
           +MRELGLVK PGCSW+++ G+V  FYQ D++H  + ++YE L G+V   M+P G+
Sbjct: 825 KMRELGLVKTPGCSWITVAGRVHKFYQEDLSHPETQMIYETLHGIVNILMLPKGW 879


>ref|XP_002306238.1| predicted protein [Populus trichocarpa] gi|222855687|gb|EEE93234.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/73 (41%), Positives = 44/73 (60%)
 Frame = +3

Query: 3   RMRELGLVKNPGCSWVSIEGKVRIFYQGDITHTWSNIVYEILDGLVRTMMPDGYGYG*LS 182
           +MRELGL K PGCSW++I G V  FYQG  +H  + +  EILD +++ +M     +G ++
Sbjct: 437 KMRELGLAKTPGCSWITIAGTVHKFYQGCHSHPLTKVTCEILDRMIKVLMLPDIWHG-MT 495

Query: 183 RYVNKAQVQLHVK 221
               KA   L +K
Sbjct: 496 SLEGKAWTTLSLK 508


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +3

Query: 6   MRELGLVKNPGCSWVSIEGKVRIFYQGDITHTWSNIVYEILDGLVRTMMPDGYG 167
           MRE GL  +PGCSWV I+GKV  F  GD +H+ S  +  +LDG    M  +G+G
Sbjct: 728 MRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFG 781


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +3

Query: 6   MRELGLVKNPGCSWVSIEGKVRIFYQGDITHTWSNIVYEILDGLVRTMMPDGYG 167
           MRE GL  +PGCSWV I+GKV  F  GD +H+ S  +  +LDG    M  +G+G
Sbjct: 728 MRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFG 781