BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040905
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6...    64   2e-08
ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786...    60   2e-07
ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795...    58   9e-07
ref|XP_002528148.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    57   2e-06

>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
           gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
           III subunit RPC6 [Medicago truncatula]
          Length = 456

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
 Frame = +3

Query: 12  GPSDLNILSL-KTIWHSQLAAHTQLFLWKLYMNYLPTGDVLDHHHIQGDHTCPLCWTVRE 188
           GPS L+   L K IW   L    + F+WKL  N +PT   L    +  D  CPLC+   E
Sbjct: 250 GPSLLHWDKLWKLIWKLPLPTRVRNFMWKLARNIIPTRCNLRRRGVVLDTVCPLCFDADE 309

Query: 189 DPTHLFFHCEWTKMVWFASELGARVENRADLT--IRNWL 299
              H F  C  T  VWFAS LG +   + DL   + +WL
Sbjct: 310 SSNHRFMACPMTLQVWFASPLGFQPPPQTDLNAWLLSWL 348


>ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786254 [Glycine max]
          Length = 3007

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +3

Query: 3    RSDGPSDLNILSLKTIWHSQLAAHTQLFLWKLYMNYLPTGDVLDHHHIQ-GDHTCPLCWT 179
            R D P +    + K +W   + +    F W L  + LPT D L   H++  DH CP C +
Sbjct: 2372 RKDIPQEAPAEAFKELWKLNVPSKVTTFAWSLLNDRLPTKDNLRRKHVELNDHLCPFCSS 2431

Query: 180  VREDPTHLFFHC 215
            V E  +HLFFHC
Sbjct: 2432 VEESASHLFFHC 2443


>ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795609 [Glycine max]
          Length = 525

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +3

Query: 48  IWHSQLAAHTQLFLWKLYMNYLPTGDVLDHHHIQ-GDHTCPLCWTVREDPTHLFFHCEWT 224
           +W  ++ A   +F W+L  + LPT   L    IQ  D  CPLC T +ED +HLFFHC   
Sbjct: 354 LWRIKVPARFLVFAWRLLRDRLPTRKNLQRRQIQLTDSLCPLCRTQQEDASHLFFHCSKV 413

Query: 225 KMVWF 239
           + +W+
Sbjct: 414 QPIWW 418


>ref|XP_002528148.1| conserved hypothetical protein [Ricinus communis]
           gi|223532446|gb|EEF34239.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
 Frame = +3

Query: 48  IWHSQLAAHTQLFLWKLYMNYLPTGDVLDHH--HIQGDHTCPLCWTVREDPT--HLFFHC 215
           +WH  +    ++F WKL  N LP G+ ++    H++G     LC+  R   T  HLF HC
Sbjct: 2   VWHLLVTNKIRVFFWKLLNNGLPIGEAINCRLLHVEG-----LCFRCRASETLDHLFLHC 56

Query: 216 EWTKMVWFASELGARVENRADLTIRN-WL 299
            W   +W  S L  R E+ A    RN WL
Sbjct: 57  PWAHTIWSRSTLSIRTESVALWKARNSWL 85


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +3

Query: 36   SLKTIWHSQLAAHTQLFLWKLYMNYLPTGDVLDHHHIQ-GDHTCPLCWTVREDPTHLFFH 212
            + + +WH ++   + +F W+L+ + LPT   L   +I   D  CPLC   +E+  HLFF+
Sbjct: 1645 NFQILWHLKIPPRSAVFSWRLFWDRLPTRGNLSKRNIPIQDTMCPLCGCQQEEAGHLFFN 1704

Query: 213  CEWTKMVWFAS 245
            C  TK +W+ S
Sbjct: 1705 CSMTKGLWWES 1715