BLASTX nr result
ID: Coptis21_contig00040905
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00040905 (324 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6... 64 2e-08 ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786... 60 2e-07 ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795... 58 9e-07 ref|XP_002528148.1| conserved hypothetical protein [Ricinus comm... 57 2e-06 ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804... 57 2e-06 >ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula] gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula] Length = 456 Score = 63.5 bits (153), Expect = 2e-08 Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 3/99 (3%) Frame = +3 Query: 12 GPSDLNILSL-KTIWHSQLAAHTQLFLWKLYMNYLPTGDVLDHHHIQGDHTCPLCWTVRE 188 GPS L+ L K IW L + F+WKL N +PT L + D CPLC+ E Sbjct: 250 GPSLLHWDKLWKLIWKLPLPTRVRNFMWKLARNIIPTRCNLRRRGVVLDTVCPLCFDADE 309 Query: 189 DPTHLFFHCEWTKMVWFASELGARVENRADLT--IRNWL 299 H F C T VWFAS LG + + DL + +WL Sbjct: 310 SSNHRFMACPMTLQVWFASPLGFQPPPQTDLNAWLLSWL 348 >ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786254 [Glycine max] Length = 3007 Score = 59.7 bits (143), Expect = 2e-07 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +3 Query: 3 RSDGPSDLNILSLKTIWHSQLAAHTQLFLWKLYMNYLPTGDVLDHHHIQ-GDHTCPLCWT 179 R D P + + K +W + + F W L + LPT D L H++ DH CP C + Sbjct: 2372 RKDIPQEAPAEAFKELWKLNVPSKVTTFAWSLLNDRLPTKDNLRRKHVELNDHLCPFCSS 2431 Query: 180 VREDPTHLFFHC 215 V E +HLFFHC Sbjct: 2432 VEESASHLFFHC 2443 >ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795609 [Glycine max] Length = 525 Score = 57.8 bits (138), Expect = 9e-07 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Frame = +3 Query: 48 IWHSQLAAHTQLFLWKLYMNYLPTGDVLDHHHIQ-GDHTCPLCWTVREDPTHLFFHCEWT 224 +W ++ A +F W+L + LPT L IQ D CPLC T +ED +HLFFHC Sbjct: 354 LWRIKVPARFLVFAWRLLRDRLPTRKNLQRRQIQLTDSLCPLCRTQQEDASHLFFHCSKV 413 Query: 225 KMVWF 239 + +W+ Sbjct: 414 QPIWW 418 >ref|XP_002528148.1| conserved hypothetical protein [Ricinus communis] gi|223532446|gb|EEF34239.1| conserved hypothetical protein [Ricinus communis] Length = 157 Score = 57.0 bits (136), Expect = 2e-06 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%) Frame = +3 Query: 48 IWHSQLAAHTQLFLWKLYMNYLPTGDVLDHH--HIQGDHTCPLCWTVREDPT--HLFFHC 215 +WH + ++F WKL N LP G+ ++ H++G LC+ R T HLF HC Sbjct: 2 VWHLLVTNKIRVFFWKLLNNGLPIGEAINCRLLHVEG-----LCFRCRASETLDHLFLHC 56 Query: 216 EWTKMVWFASELGARVENRADLTIRN-WL 299 W +W S L R E+ A RN WL Sbjct: 57 PWAHTIWSRSTLSIRTESVALWKARNSWL 85 >ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max] Length = 4413 Score = 56.6 bits (135), Expect = 2e-06 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Frame = +3 Query: 36 SLKTIWHSQLAAHTQLFLWKLYMNYLPTGDVLDHHHIQ-GDHTCPLCWTVREDPTHLFFH 212 + + +WH ++ + +F W+L+ + LPT L +I D CPLC +E+ HLFF+ Sbjct: 1645 NFQILWHLKIPPRSAVFSWRLFWDRLPTRGNLSKRNIPIQDTMCPLCGCQQEEAGHLFFN 1704 Query: 213 CEWTKMVWFAS 245 C TK +W+ S Sbjct: 1705 CSMTKGLWWES 1715