BLASTX nr result

ID: Coptis21_contig00040894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040894
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338933.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002327274.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002325969.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_004141652.1| PREDICTED: uncharacterized protein LOC101211...    61   1e-07
ref|XP_002265921.2| PREDICTED: uncharacterized protein LOC100249...    61   1e-07

>ref|XP_002338933.1| predicted protein [Populus trichocarpa] gi|222873955|gb|EEF11086.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = +2

Query: 125 AAASHEPLLGDTNSNDVVEGVVDYKGRSVINRSNYGGWRSASFIIGVEIAERFAYH 292
           ++++  PLL    S D+V+G VDYK R    RSN GGWRSASFIIGVE+AERFAY+
Sbjct: 2   SSSNQTPLL----SYDIVDGSVDYKSRPAY-RSNSGGWRSASFIIGVEVAERFAYY 52


>ref|XP_002327274.1| predicted protein [Populus trichocarpa] gi|222835644|gb|EEE74079.1|
           predicted protein [Populus trichocarpa]
          Length = 1099

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = +2

Query: 125 AAASHEPLLGDTNSNDVVEGVVDYKGRSVINRSNYGGWRSASFIIGVEIAERFAYH 292
           ++++  PLL    S D+V+G VDYK R    RSN GGWRSASFIIGVE+AERFAY+
Sbjct: 546 SSSNQTPLL----SYDIVDGSVDYKSRPAY-RSNSGGWRSASFIIGVEVAERFAYY 596


>ref|XP_002325969.1| predicted protein [Populus trichocarpa] gi|222862844|gb|EEF00351.1|
           predicted protein [Populus trichocarpa]
          Length = 1098

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +2

Query: 170 DVVEGVVDYKGRSVINRSNYGGWRSASFIIGVEIAERFAYH 292
           D+V+G VD+KGR V  RSN GGWRSA FIIGVE+AERFAY+
Sbjct: 550 DIVDGSVDHKGRPVY-RSNSGGWRSAGFIIGVEVAERFAYY 589



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = +2

Query: 176 VEGVVDYKGRSVINRSNYGGWRSASFIIGVEIAERFAYH 292
           V G VDYKG  V +RS  GGWRSASFII VE+AERFAY+
Sbjct: 13  VNGSVDYKGNPV-HRSGSGGWRSASFIIAVEVAERFAYY 50


>ref|XP_004141652.1| PREDICTED: uncharacterized protein LOC101211419 [Cucumis sativus]
          Length = 1136

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/59 (57%), Positives = 41/59 (69%)
 Frame = +2

Query: 116 SGDAAASHEPLLGDTNSNDVVEGVVDYKGRSVINRSNYGGWRSASFIIGVEIAERFAYH 292
           S  A++   PLL  T     VEG VD+KGR V+ R   GGWRSASF+IGVE+AERFAY+
Sbjct: 20  SASASSLPTPLLSQT-----VEGAVDFKGRPVL-RFCSGGWRSASFMIGVEVAERFAYY 72


>ref|XP_002265921.2| PREDICTED: uncharacterized protein LOC100249450 [Vitis vinifera]
          Length = 1115

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/59 (55%), Positives = 40/59 (67%)
 Frame = +2

Query: 116 SGDAAASHEPLLGDTNSNDVVEGVVDYKGRSVINRSNYGGWRSASFIIGVEIAERFAYH 292
           S  +  +  PLL DT     V+G  D+KGR    RS+ GGWRSASFIIGVE+AERFAY+
Sbjct: 4   SSISGGTETPLLDDT-----VDGFADHKGRPA-RRSSSGGWRSASFIIGVEVAERFAYY 56


Top