BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040891
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    57   2e-06

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
 Frame = -1

Query: 314 KELSNAAAVHLMVQLWKTRNKILFEHKKLNMTQLKNDIIKGV-QAAGLLTTGTMFNTMED 138
           + + N+A VH+M  +W   N   F+  +  M+ L N I+  V + + +L      ++M+D
Sbjct: 162 QHVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQD 221

Query: 137 LDLPTFFNLKGRAKKLN-IREVIWFAPQWGVVKANTDGSVLGNP 9
             L   F++  +  ++N  RE+IW  P  G +K N DGSV+G+P
Sbjct: 222 FKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSP 265