BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040855
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...    77   2e-12
gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymera...    65   4e-09
emb|CAN61858.1| hypothetical protein VITISV_016691 [Vitis vinifera]    65   7e-09
gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]        64   1e-08
emb|CAN71132.1| hypothetical protein VITISV_007235 [Vitis vinifera]    62   4e-08

>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/82 (52%), Positives = 52/82 (63%)
 Frame = -1

Query: 247  AKLSSVLLMHGLQRSGADPSLFVKKTMDGXXXXXXXXXXXXITGDNHGEILKLKALLHNR 68
            AKLSSVL   G +RS AD SLFV+ +  G            +TGD+  EI +LK  LH +
Sbjct: 911  AKLSSVLENIGFKRSNADSSLFVRDSSAGKLIVLIYVDDLIVTGDSLTEIQRLKGFLHKK 970

Query: 67   FAIKDLGVLKYFLGLEVAYSKR 2
            FAIKDLG LKYFLG+EVA S +
Sbjct: 971  FAIKDLGTLKYFLGIEVASSSK 992


>gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymerase) [Medicago
           truncatula]
          Length = 293

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/80 (41%), Positives = 48/80 (60%)
 Frame = -1

Query: 244 KLSSVLLMHGLQRSGADPSLFVKKTMDGXXXXXXXXXXXXITGDNHGEILKLKALLHNRF 65
           KL+++L+  G +++ +D SLF+K T               + GD   E   +K +LH+ F
Sbjct: 143 KLTNILISTGYKQAASDASLFIKHTHSSFTILLVYVDDVILAGDTLSEFNTIKGVLHDAF 202

Query: 64  AIKDLGVLKYFLGLEVAYSK 5
            IKD+G LKYFLGLEVA+SK
Sbjct: 203 KIKDIGQLKYFLGLEVAHSK 222


>emb|CAN61858.1| hypothetical protein VITISV_016691 [Vitis vinifera]
          Length = 763

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/81 (41%), Positives = 48/81 (59%)
 Frame = -1

Query: 244 KLSSVLLMHGLQRSGADPSLFVKKTMDGXXXXXXXXXXXXITGDNHGEILKLKALLHNRF 65
           K S  +   G+ +S  D S+F KK++ G            ITG++H  I  LKA +H++F
Sbjct: 412 KFSKEIQAFGMNKSEKDHSVFYKKSVAGIILLVVYVDDIVITGNDHARISDLKAFMHSKF 471

Query: 64  AIKDLGVLKYFLGLEVAYSKR 2
             KDLG LKYFLG+EV+ SK+
Sbjct: 472 HTKDLGELKYFLGIEVSRSKK 492


>gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]
          Length = 1347

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/78 (48%), Positives = 44/78 (56%)
 Frame = -1

Query: 244  KLSSVLLMHGLQRSGADPSLFVKKTMDGXXXXXXXXXXXXITGDNHGEILKLKALLHNRF 65
            KLS  L+  G ++  +D SLFV    +G            ITG N G I  LK  LHNRF
Sbjct: 1021 KLSGELMNLGFKKCYSDSSLFVLNKPEGKVIILVYVDDILITGSNKGMIDDLKLQLHNRF 1080

Query: 64   AIKDLGVLKYFLGLEVAY 11
             IKDLG LKYFLG+E AY
Sbjct: 1081 DIKDLGKLKYFLGVEFAY 1098


>emb|CAN71132.1| hypothetical protein VITISV_007235 [Vitis vinifera]
          Length = 1259

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/81 (40%), Positives = 46/81 (56%)
 Frame = -1

Query: 244  KLSSVLLMHGLQRSGADPSLFVKKTMDGXXXXXXXXXXXXITGDNHGEILKLKALLHNRF 65
            K S  +   G+ +S  D S+F KK+  G            ITG++H  I  LK  +H++F
Sbjct: 964  KFSKEIQAFGMNKSEKDHSVFYKKSAXGIILLVVYVDDIVITGNDHAGISBLKTFMHSKF 1023

Query: 64   AIKDLGVLKYFLGLEVAYSKR 2
              KDLG LKYFLG+EV+ SK+
Sbjct: 1024 HTKDLGELKYFLGIEVSRSKK 1044