BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040829
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27249.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp....   105   3e-21
ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|NP_178437.1| pentatricopeptide repeat-containing protein [Ar...   105   3e-21

>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/74 (70%), Positives = 61/74 (82%)
 Frame = -2

Query: 226 RSEEALEFIEGMPVQADAGVWGALLHGCRLHSRSDLGEIAVRKMIELQPDDAGYYVLMSN 47
           R EEAL+FIE +P+Q D  + GA LHGCRLHSR DLGE+AVR+M+EL PD A YYVLMSN
Sbjct: 593 RLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSN 652

Query: 46  LYASDGRWEQVNQM 5
           LYAS+GRW Q NQ+
Sbjct: 653 LYASEGRWSQANQV 666


>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/74 (70%), Positives = 61/74 (82%)
 Frame = -2

Query: 226 RSEEALEFIEGMPVQADAGVWGALLHGCRLHSRSDLGEIAVRKMIELQPDDAGYYVLMSN 47
           R EEAL+FIE +P+Q D  + GA LHGCRLHSR DLGE+AVR+M+EL PD A YYVLMSN
Sbjct: 592 RLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSN 651

Query: 46  LYASDGRWEQVNQM 5
           LYAS+GRW Q NQ+
Sbjct: 652 LYASEGRWSQANQV 665


>ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297814638|ref|XP_002875202.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321039|gb|EFH51460.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321040|gb|EFH51461.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  105 bits (263), Expect = 3e-21
 Identities = 46/73 (63%), Positives = 58/73 (79%)
 Frame = -2

Query: 220 EEALEFIEGMPVQADAGVWGALLHGCRLHSRSDLGEIAVRKMIELQPDDAGYYVLMSNLY 41
           E+AL+ IE MP+Q D   +GA LHGC +HSR DLGEI ++KM++L PDDA YYVL+SNLY
Sbjct: 611 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLY 670

Query: 40  ASDGRWEQVNQMR 2
           ASDGRW Q  ++R
Sbjct: 671 ASDGRWSQAKEVR 683


>ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|222865142|gb|EEF02273.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/75 (64%), Positives = 60/75 (80%)
 Frame = -2

Query: 226 RSEEALEFIEGMPVQADAGVWGALLHGCRLHSRSDLGEIAVRKMIELQPDDAGYYVLMSN 47
           R +EAL+FI+ MPVQ D  ++GA LHGC LHSR DLGE+A+++M+EL P DA YYVLM N
Sbjct: 557 RLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCN 616

Query: 46  LYASDGRWEQVNQMR 2
           LYASD RW +V Q+R
Sbjct: 617 LYASDARWSKVKQVR 631


>ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
           gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis
           thaliana] gi|330250600|gb|AEC05694.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  105 bits (263), Expect = 3e-21
 Identities = 46/73 (63%), Positives = 58/73 (79%)
 Frame = -2

Query: 220 EEALEFIEGMPVQADAGVWGALLHGCRLHSRSDLGEIAVRKMIELQPDDAGYYVLMSNLY 41
           E+AL+ IE MP+Q D   +GA LHGC +HSR DLGEI ++KM++L PDDA YYVL+SNLY
Sbjct: 599 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLY 658

Query: 40  ASDGRWEQVNQMR 2
           ASDGRW Q  ++R
Sbjct: 659 ASDGRWNQAKEVR 671