BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040825
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24452.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_003629226.1| Pentatricopeptide repeat-containing protein ...   131   7e-29
ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
gb|ACU21153.1| unknown [Glycine max]                                  129   3e-28
ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27

>emb|CBI24452.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/86 (75%), Positives = 77/86 (89%)
 Frame = -1

Query: 258 NEALELIESMPVKGGKDVYGALLGACRIHNNIELAEEAAERLFVLDPQNAGRYIILAKMY 79
           +EA+E +++MPV+ GKDVYGALLGACRIHNNIELAEE AE+LFVLDP NAGRYIIL KMY
Sbjct: 365 HEAVEFVKNMPVQPGKDVYGALLGACRIHNNIELAEEIAEKLFVLDPDNAGRYIILVKMY 424

Query: 78  EDAGRWTDAARVRKALREKQIKKQPG 1
           EDAG+W +AAR+RKAL+EK I+K  G
Sbjct: 425 EDAGKWENAARLRKALKEKNIRKPLG 450


>ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523248|gb|AET03702.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 510

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/85 (74%), Positives = 75/85 (88%)
 Frame = -1

Query: 255 EALELIESMPVKGGKDVYGALLGACRIHNNIELAEEAAERLFVLDPQNAGRYIILAKMYE 76
           +A+ELI+SMP++ GK+VYGALLGA RIH NIELAE AAE+LFVLDP NAGRY+ILA+MYE
Sbjct: 377 KAMELIQSMPIQPGKNVYGALLGASRIHKNIELAELAAEKLFVLDPNNAGRYVILAQMYE 436

Query: 75  DAGRWTDAARVRKALREKQIKKQPG 1
           D GRW DAAR+RK +REK+IKK  G
Sbjct: 437 DEGRWKDAARLRKIIREKEIKKPIG 461


>ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 503

 Score =  129 bits (324), Expect = 3e-28
 Identities = 60/85 (70%), Positives = 75/85 (88%)
 Frame = -1

Query: 255 EALELIESMPVKGGKDVYGALLGACRIHNNIELAEEAAERLFVLDPQNAGRYIILAKMYE 76
           +A+E I+SMP++ GK++YGALLGACRIH N+ELAE AAE+LFVLDP NAGRY+ILA+MYE
Sbjct: 375 KAVEFIQSMPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDPDNAGRYVILAQMYE 434

Query: 75  DAGRWTDAARVRKALREKQIKKQPG 1
           DA RW DAARVRK +++K+IKK  G
Sbjct: 435 DAERWQDAARVRKVVKDKEIKKPIG 459


>gb|ACU21153.1| unknown [Glycine max]
          Length = 529

 Score =  129 bits (324), Expect = 3e-28
 Identities = 60/85 (70%), Positives = 75/85 (88%)
 Frame = -1

Query: 255 EALELIESMPVKGGKDVYGALLGACRIHNNIELAEEAAERLFVLDPQNAGRYIILAKMYE 76
           +A+E I+SMP++ GK++YGALLGACRIH N+ELAE AAE+LFVLDP NAGRY+ILA+MYE
Sbjct: 375 KAVEFIQSMPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDPDNAGRYVILAQMYE 434

Query: 75  DAGRWTDAARVRKALREKQIKKQPG 1
           DA RW DAARVRK +++K+IKK  G
Sbjct: 435 DAERWLDAARVRKVVKDKEIKKPIG 459


>ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 480

 Score =  125 bits (315), Expect = 3e-27
 Identities = 56/85 (65%), Positives = 71/85 (83%)
 Frame = -1

Query: 255 EALELIESMPVKGGKDVYGALLGACRIHNNIELAEEAAERLFVLDPQNAGRYIILAKMYE 76
           +A+E IE MPV+ GKDVYGALLGACRIHNN+ELA+E  E+LF+LDP+ A RY+ LA MYE
Sbjct: 352 QAVEFIEGMPVQAGKDVYGALLGACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYE 411

Query: 75  DAGRWTDAARVRKALREKQIKKQPG 1
           DAG+W DAA++RK LR++ I+K  G
Sbjct: 412 DAGQWEDAAKLRKLLRDRNIRKPAG 436