BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040817
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   172   2e-41
emb|CBI36131.3| unnamed protein product [Vitis vinifera]              172   2e-41
ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat...   170   1e-40
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]    167   6e-40

>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/114 (75%), Positives = 98/114 (85%)
 Frame = -2

Query: 344 SVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKLMKDRGLKKSIACSWI 165
           +VELGE AL RLI+LEP DAGNYVILSNIYAQAGKWEGVA++RKLM DR LKKSIACSWI
Sbjct: 460 NVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWI 519

Query: 164 KVKNEVHAFLVEDMSHPQTEKIYAELERVEELMTDAGYVPDTTPVFHDVEEDEK 3
           +VKN+VHAFL  D SHP +++IY+ELERV  LM +AGY P T  VFHDVE+DEK
Sbjct: 520 EVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEK 573


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/114 (75%), Positives = 98/114 (85%)
 Frame = -2

Query: 344 SVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKLMKDRGLKKSIACSWI 165
           +VELGE AL RLI+LEP DAGNYVILSNIYAQAGKWEGVA++RKLM DR LKKSIACSWI
Sbjct: 362 NVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWI 421

Query: 164 KVKNEVHAFLVEDMSHPQTEKIYAELERVEELMTDAGYVPDTTPVFHDVEEDEK 3
           +VKN+VHAFL  D SHP +++IY+ELERV  LM +AGY P T  VFHDVE+DEK
Sbjct: 422 EVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEK 475


>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/115 (70%), Positives = 101/115 (87%)
 Frame = -2

Query: 347 GSVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKLMKDRGLKKSIACSW 168
           G+VEL E AL +LI+LEP D+GNYVIL+N+YAQ+GKWEGVAR+R+LM D+G+KK+IACSW
Sbjct: 442 GNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSW 501

Query: 167 IKVKNEVHAFLVEDMSHPQTEKIYAELERVEELMTDAGYVPDTTPVFHDVEEDEK 3
           I+VKN+V+AFL  D+SHP +  IYAEL+R+E LM +AGYVPDT  VFHDVEEDEK
Sbjct: 502 IEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEK 556


>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/114 (70%), Positives = 96/114 (84%)
 Frame = -2

Query: 344 SVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKLMKDRGLKKSIACSWI 165
           +VELGE AL +LI+LEP DAGNYV+LSNIYAQ+GKWE  ARVRKLM +RGLKK I CSWI
Sbjct: 449 NVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWI 508

Query: 164 KVKNEVHAFLVEDMSHPQTEKIYAELERVEELMTDAGYVPDTTPVFHDVEEDEK 3
           ++K + H FLV D SHP++ +IY ELER+E LM+DAGY+PDT PVFHDV +DEK
Sbjct: 509 ELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDTMPVFHDVGDDEK 562


>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/114 (69%), Positives = 97/114 (85%)
 Frame = -2

Query: 344 SVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKLMKDRGLKKSIACSWI 165
           +VELGE AL +LI+LEP DAGNYV LSNIYAQ+GKWE  ARVRKLM +RGLKK +ACSWI
Sbjct: 449 NVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWI 508

Query: 164 KVKNEVHAFLVEDMSHPQTEKIYAELERVEELMTDAGYVPDTTPVFHDVEEDEK 3
           ++K + H FLV D SHP++++IY ELER+E LM+DAGYVPD  PVFH+V++DEK
Sbjct: 509 ELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVDDDEK 562