BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040813
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   120   9e-26
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24

>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/87 (66%), Positives = 72/87 (82%)
 Frame = +2

Query: 2   KNLVLWTIMISGYAEQGLAKEAFLLYDEMEKVGLEPDSGTFTSIIAACAESGLLDLGKRI 181
           KNLV WTIMISGYAE+GLAK+A  LY++ME+ GL+ D GT  SI++ACA SGLL LGKR+
Sbjct: 274 KNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRV 333

Query: 182 HLSVERSRFRHCTKLCNALVDMYAKCG 262
           H S+ER+RF+  T + NAL+DMYAKCG
Sbjct: 334 HASIERTRFKCSTPVSNALIDMYAKCG 360


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/88 (64%), Positives = 71/88 (80%)
 Frame = +2

Query: 2   KNLVLWTIMISGYAEQGLAKEAFLLYDEMEKVGLEPDSGTFTSIIAACAESGLLDLGKRI 181
           KNLV WTI+ISG+AE+GLAKEA  LY++ME  GL+PD GT  SI+AACAESGLL LGK++
Sbjct: 280 KNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKV 339

Query: 182 HLSVERSRFRHCTKLCNALVDMYAKCGR 265
           H S+++ R +    + NALVDMYAKCGR
Sbjct: 340 HASIKKIRIKCSVNVSNALVDMYAKCGR 367


>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/88 (61%), Positives = 71/88 (80%)
 Frame = +2

Query: 2   KNLVLWTIMISGYAEQGLAKEAFLLYDEMEKVGLEPDSGTFTSIIAACAESGLLDLGKRI 181
           KNLV WTI++SGYA +GLAK+A   +++ME+ GL+PD GT  SI+A+CAESGLL LGKR+
Sbjct: 103 KNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRV 162

Query: 182 HLSVERSRFRHCTKLCNALVDMYAKCGR 265
           H S+ER R++    + NALVDMYAKCG+
Sbjct: 163 HTSIERIRYKCSVNVSNALVDMYAKCGQ 190


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/88 (62%), Positives = 73/88 (82%)
 Frame = +2

Query: 2   KNLVLWTIMISGYAEQGLAKEAFLLYDEMEKVGLEPDSGTFTSIIAACAESGLLDLGKRI 181
           KNLV WTI++SG+AE+GLA+EA  L+D+MEK  L+ D+GT  SI+AACAESGLL LG++I
Sbjct: 278 KNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKI 337

Query: 182 HLSVERSRFRHCTKLCNALVDMYAKCGR 265
           H S++ + F+  T++ NALVDMYAKCGR
Sbjct: 338 HASIKNNNFKCTTEISNALVDMYAKCGR 365


>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 561

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/87 (62%), Positives = 72/87 (82%)
 Frame = +2

Query: 2   KNLVLWTIMISGYAEQGLAKEAFLLYDEMEKVGLEPDSGTFTSIIAACAESGLLDLGKRI 181
           KNLV WTI++SG+AE+GLA+EA  L+D+MEK  L+ D+GT  SI+AACAESGLL LG++I
Sbjct: 304 KNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKI 363

Query: 182 HLSVERSRFRHCTKLCNALVDMYAKCG 262
           H S++ + F+  T++ NALVDMYAKCG
Sbjct: 364 HASIKNNNFKCTTEISNALVDMYAKCG 390