BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040809
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat...    60   2e-07
ref|NP_173127.4| pentatricopeptide repeat-containing protein [Ar...    56   3e-06

>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
           unnamed protein product [Vitis vinifera]
          Length = 659

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
 Frame = -1

Query: 259 DWYSYIXXXXXXXXXXXLDKAIRVF---VTNDLFHDVHVLTLMIAELIRLGRLDTAIRIF 89
           D YS++           +D+A+ V+   + N    D H+ T++I  LI+ G+   A+R+F
Sbjct: 433 DQYSFVGLLSGLCGSGRVDEAVNVYSGILVNHSDLDAHIHTVIIGGLIKAGKFHRAVRLF 492

Query: 88  SKAVEEKFPLDVVSYTVVICGLVKVG 11
            KA+ E++ LD VSYTV I GL+K G
Sbjct: 493 KKAMVERYTLDAVSYTVAIYGLLKGG 518


>ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g16830 gi|332191383|gb|AEE29504.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 608

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/62 (41%), Positives = 39/62 (62%)
 Frame = -1

Query: 202 KAIRVFVTNDLFHDVHVLTLMIAELIRLGRLDTAIRIFSKAVEEKFPLDVVSYTVVICGL 23
           K  ++ +      D H  + +I  LI LG+ +TA+ +F + + EK+PLDVVSYTV I GL
Sbjct: 440 KMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGL 499

Query: 22  VK 17
           V+
Sbjct: 500 VR 501