BLASTX nr result

ID: Coptis21_contig00040801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040801
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75105.1| hypothetical protein VITISV_019068 [Vitis vinifera]    77   2e-12
gb|ADD09593.1| bristled-like protein [Trifolium repens]                75   5e-12
ref|XP_002310959.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
gb|ADD09615.1| bristled-like protein [Trifolium repens]                65   4e-09
emb|CBI33038.3| unnamed protein product [Vitis vinifera]               65   4e-09

>emb|CAN75105.1| hypothetical protein VITISV_019068 [Vitis vinifera]
          Length = 419

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = -1

Query: 273 MTFKGHDR-KKSFIPKIFATGDKKGRTLKEDTLDDSVSETRTTPKPEKLNFSALASPMST 97
           M  K  D+ KKSFI K+F+T ++ GR + +   D S +++        L F     PMS 
Sbjct: 1   MALKNGDKGKKSFIQKLFSTMERNGRKITKXLFDSSGAKSNLDIG--NLFFCGEGPPMSN 58

Query: 96  DPDVQHIRVFVATWNVGGKAPHGGLNLDSFL 4
              V+ +RVFVATWNVGGK+PH GLNLD FL
Sbjct: 59  GQGVEPVRVFVATWNVGGKSPHSGLNLDDFL 89


>gb|ADD09593.1| bristled-like protein [Trifolium repens]
          Length = 518

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
 Frame = -1

Query: 264 KGHDRKKSFIPKIFATGDKKGR-----TLKEDTLDDSVS---ETRTTPKPEKLNFSALAS 109
           K   +KKS +PKIF +  + GR      LK +T  DS+S   E  T+P  E LN S    
Sbjct: 47  KNEKKKKSLLPKIFGS-KRNGRGSDEDALKPNTEGDSISISLERETSPGIEGLNLSNFER 105

Query: 108 PMSTDPDVQHIRVFVATWNVGGKAPHGGLNLDSFL 4
           PM+ + ++Q  RVFVATWNVGGK+P+  LNL  FL
Sbjct: 106 PMAPENEIQSFRVFVATWNVGGKSPNFDLNLQDFL 140


>ref|XP_002310959.1| predicted protein [Populus trichocarpa] gi|222850779|gb|EEE88326.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
 Frame = -1

Query: 330 SFSIGSYVCFYSKKFEVVEMTFKGHDR-KKSFIPKIFATGDKKGRTLKEDTLDDSVSETR 154
           S +I  ++  + +   V +MT +  D+ KKSF+ K+    + +GR  +E + D S  E  
Sbjct: 3   SDAIAIFLKVFDENRAVSDMTLENQDQNKKSFLRKLLLQKEVRGRKAEEVSFDSS--EAL 60

Query: 153 TTPKPEKLNFSALASPMSTDPDVQHIRVFVATWNVGGKAPHGGLNLDSFLR 1
           + P  + L    L+SPM     VQ   VFVATWNVGGK+PH GLNLD FL+
Sbjct: 61  SDPSLKSLFSHQLSSPMPCS-QVQSFSVFVATWNVGGKSPHSGLNLDDFLQ 110


>gb|ADD09615.1| bristled-like protein [Trifolium repens]
          Length = 582

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 33/120 (27%)
 Frame = -1

Query: 264 KGHDRKKSFIPKIFATGDKKGR-----TLKEDTLDDSV---------------------- 166
           K   +KKS +PKIF +  + GR      LK +T  DS+                      
Sbjct: 47  KNEKKKKSLLPKIFGS-KRNGRGSDEDALKPNTEGDSISISLDLEKKIETRRKAFLEASP 105

Query: 165 ------SETRTTPKPEKLNFSALASPMSTDPDVQHIRVFVATWNVGGKAPHGGLNLDSFL 4
                 SE  T+P  E LN S    PM+ + ++Q  RVFVATWNVGGK+P+  LNL  FL
Sbjct: 106 IMRKSFSERETSPGIEGLNLSNFERPMAPENEIQSFRVFVATWNVGGKSPNFDLNLQDFL 165


>emb|CBI33038.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/55 (56%), Positives = 38/55 (69%)
 Frame = -1

Query: 165 SETRTTPKPEKLNFSALASPMSTDPDVQHIRVFVATWNVGGKAPHGGLNLDSFLR 1
           SE  T+P  E LN S   SPM+   + Q +RVFVATWNVGGK P+ GLNL+ FL+
Sbjct: 48  SERETSPGIEGLNLSNFDSPMAPPTEFQDVRVFVATWNVGGKTPNAGLNLEDFLQ 102


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