BLASTX nr result
ID: Coptis21_contig00040801
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00040801 (333 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN75105.1| hypothetical protein VITISV_019068 [Vitis vinifera] 77 2e-12 gb|ADD09593.1| bristled-like protein [Trifolium repens] 75 5e-12 ref|XP_002310959.1| predicted protein [Populus trichocarpa] gi|2... 75 7e-12 gb|ADD09615.1| bristled-like protein [Trifolium repens] 65 4e-09 emb|CBI33038.3| unnamed protein product [Vitis vinifera] 65 4e-09 >emb|CAN75105.1| hypothetical protein VITISV_019068 [Vitis vinifera] Length = 419 Score = 76.6 bits (187), Expect = 2e-12 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 1/91 (1%) Frame = -1 Query: 273 MTFKGHDR-KKSFIPKIFATGDKKGRTLKEDTLDDSVSETRTTPKPEKLNFSALASPMST 97 M K D+ KKSFI K+F+T ++ GR + + D S +++ L F PMS Sbjct: 1 MALKNGDKGKKSFIQKLFSTMERNGRKITKXLFDSSGAKSNLDIG--NLFFCGEGPPMSN 58 Query: 96 DPDVQHIRVFVATWNVGGKAPHGGLNLDSFL 4 V+ +RVFVATWNVGGK+PH GLNLD FL Sbjct: 59 GQGVEPVRVFVATWNVGGKSPHSGLNLDDFL 89 >gb|ADD09593.1| bristled-like protein [Trifolium repens] Length = 518 Score = 75.1 bits (183), Expect = 5e-12 Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 8/95 (8%) Frame = -1 Query: 264 KGHDRKKSFIPKIFATGDKKGR-----TLKEDTLDDSVS---ETRTTPKPEKLNFSALAS 109 K +KKS +PKIF + + GR LK +T DS+S E T+P E LN S Sbjct: 47 KNEKKKKSLLPKIFGS-KRNGRGSDEDALKPNTEGDSISISLERETSPGIEGLNLSNFER 105 Query: 108 PMSTDPDVQHIRVFVATWNVGGKAPHGGLNLDSFL 4 PM+ + ++Q RVFVATWNVGGK+P+ LNL FL Sbjct: 106 PMAPENEIQSFRVFVATWNVGGKSPNFDLNLQDFL 140 >ref|XP_002310959.1| predicted protein [Populus trichocarpa] gi|222850779|gb|EEE88326.1| predicted protein [Populus trichocarpa] Length = 493 Score = 74.7 bits (182), Expect = 7e-12 Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 1/111 (0%) Frame = -1 Query: 330 SFSIGSYVCFYSKKFEVVEMTFKGHDR-KKSFIPKIFATGDKKGRTLKEDTLDDSVSETR 154 S +I ++ + + V +MT + D+ KKSF+ K+ + +GR +E + D S E Sbjct: 3 SDAIAIFLKVFDENRAVSDMTLENQDQNKKSFLRKLLLQKEVRGRKAEEVSFDSS--EAL 60 Query: 153 TTPKPEKLNFSALASPMSTDPDVQHIRVFVATWNVGGKAPHGGLNLDSFLR 1 + P + L L+SPM VQ VFVATWNVGGK+PH GLNLD FL+ Sbjct: 61 SDPSLKSLFSHQLSSPMPCS-QVQSFSVFVATWNVGGKSPHSGLNLDDFLQ 110 >gb|ADD09615.1| bristled-like protein [Trifolium repens] Length = 582 Score = 65.5 bits (158), Expect = 4e-09 Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 33/120 (27%) Frame = -1 Query: 264 KGHDRKKSFIPKIFATGDKKGR-----TLKEDTLDDSV---------------------- 166 K +KKS +PKIF + + GR LK +T DS+ Sbjct: 47 KNEKKKKSLLPKIFGS-KRNGRGSDEDALKPNTEGDSISISLDLEKKIETRRKAFLEASP 105 Query: 165 ------SETRTTPKPEKLNFSALASPMSTDPDVQHIRVFVATWNVGGKAPHGGLNLDSFL 4 SE T+P E LN S PM+ + ++Q RVFVATWNVGGK+P+ LNL FL Sbjct: 106 IMRKSFSERETSPGIEGLNLSNFERPMAPENEIQSFRVFVATWNVGGKSPNFDLNLQDFL 165 >emb|CBI33038.3| unnamed protein product [Vitis vinifera] Length = 560 Score = 65.5 bits (158), Expect = 4e-09 Identities = 31/55 (56%), Positives = 38/55 (69%) Frame = -1 Query: 165 SETRTTPKPEKLNFSALASPMSTDPDVQHIRVFVATWNVGGKAPHGGLNLDSFLR 1 SE T+P E LN S SPM+ + Q +RVFVATWNVGGK P+ GLNL+ FL+ Sbjct: 48 SERETSPGIEGLNLSNFDSPMAPPTEFQDVRVFVATWNVGGKTPNAGLNLEDFLQ 102