BLASTX nr result

ID: Coptis21_contig00040785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040785
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281860.2| PREDICTED: lysine-specific histone demethyla...    70   2e-10
ref|XP_002316929.1| hypothetical protein POPTRDRAFT_568963 [Popu...    62   4e-08
emb|CBI20361.3| unnamed protein product [Vitis vinifera]               61   1e-07

>ref|XP_002281860.2| PREDICTED: lysine-specific histone demethylase 1 homolog 2-like
           [Vitis vinifera]
          Length = 755

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/77 (45%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   KVTFGKSKDKCSSIYSCEKVENGWQQSLEIPVALYAVLSREQAHKIQSSNGEDESKLFLL 182
           +++ G S  + SS    +++EN  Q S ++P+ LY +LSREQAH++Q   GEDES+L  L
Sbjct: 652 RISVGNSSSENSSE---KEIENSSQNSPDLPLQLYTMLSREQAHQVQLIAGEDESRLSFL 708

Query: 183 YRNLGLTLVGPSGLGSL 233
            ++LGL L+GPS +GS+
Sbjct: 709 LKDLGLKLMGPSSMGSI 725


>ref|XP_002316929.1| hypothetical protein POPTRDRAFT_568963 [Populus trichocarpa]
           gi|222859994|gb|EEE97541.1| hypothetical protein
           POPTRDRAFT_568963 [Populus trichocarpa]
          Length = 712

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/74 (47%), Positives = 45/74 (60%)
 Frame = +3

Query: 3   KVTFGKSKDKCSSIYSCEKVENGWQQSLEIPVALYAVLSREQAHKIQSSNGEDESKLFLL 182
           +VTF    D        E++EN +Q+ L +P+ LY VLSREQA  +Q   G D+ KL  L
Sbjct: 616 RVTFDSRGDDLK-----EELENSFQRPLNLPLQLYTVLSREQAQSLQLVTGGDDCKLSHL 670

Query: 183 YRNLGLTLVGPSGL 224
            RNLGL L+GPS L
Sbjct: 671 SRNLGLKLMGPSAL 684


>emb|CBI20361.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/50 (54%), Positives = 39/50 (78%)
 Frame = +3

Query: 84  LEIPVALYAVLSREQAHKIQSSNGEDESKLFLLYRNLGLTLVGPSGLGSL 233
           + +P+ LY +LSREQAH++Q   GEDES+L  L ++LGL L+GPS +GS+
Sbjct: 588 INLPLQLYTMLSREQAHQVQLIAGEDESRLSFLLKDLGLKLMGPSSMGSI 637


Top