BLASTX nr result

ID: Coptis21_contig00040753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040753
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arab...    55   4e-06
ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis...    55   4e-06
ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818...    55   6e-06
gb|AFK35450.1| unknown [Medicago truncatula]                           55   8e-06
ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807...    55   8e-06

>ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
           lyrata] gi|297310551|gb|EFH40975.1| hypothetical protein
           ARALYDRAFT_358310 [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 238 TRIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339
           TR+I+DRETGRSRGFGF+ F S E A SAIQA+D
Sbjct: 69  TRVILDRETGRSRGFGFVTFTSSEAASSAIQALD 102


>ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
           gi|9759450|dbj|BAB10366.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974556|gb|AAL31194.1|
           AT5g61030/maf19_30 [Arabidopsis thaliana]
           gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30
           [Arabidopsis thaliana] gi|225879144|dbj|BAH30642.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332010031|gb|AED97414.1| glycine-rich RNA-binding
           protein 3 [Arabidopsis thaliana]
          Length = 309

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 238 TRIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339
           TR+I+DRETGRSRGFGF+ F S E A SAIQA+D
Sbjct: 69  TRVILDRETGRSRGFGFVTFTSSEAASSAIQALD 102


>ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
          Length = 245

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +1

Query: 241 RIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339
           ++IMDRETGRSRGFGFI FA+ E+A SAIQ MD
Sbjct: 70  KVIMDRETGRSRGFGFITFATSEDASSAIQGMD 102


>gb|AFK35450.1| unknown [Medicago truncatula]
          Length = 176

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +1

Query: 241 RIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339
           +IIMDR+TGRSRGFGFI FA+ E A SA+QAMD
Sbjct: 70  KIIMDRDTGRSRGFGFITFATSEEASSALQAMD 102


>ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
          Length = 244

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +1

Query: 241 RIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339
           ++IMDRETGRSRGFGF+ FA+ E+A SAIQ MD
Sbjct: 70  KVIMDRETGRSRGFGFVTFATSEDASSAIQGMD 102


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