BLASTX nr result
ID: Coptis21_contig00040753
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00040753 (341 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arab... 55 4e-06 ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis... 55 4e-06 ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818... 55 6e-06 gb|AFK35450.1| unknown [Medicago truncatula] 55 8e-06 ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807... 55 8e-06 >ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp. lyrata] gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp. lyrata] Length = 327 Score = 55.5 bits (132), Expect = 4e-06 Identities = 25/34 (73%), Positives = 29/34 (85%) Frame = +1 Query: 238 TRIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339 TR+I+DRETGRSRGFGF+ F S E A SAIQA+D Sbjct: 69 TRVILDRETGRSRGFGFVTFTSSEAASSAIQALD 102 >ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana] gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana] gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana] gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana] gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana] gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana] Length = 309 Score = 55.5 bits (132), Expect = 4e-06 Identities = 25/34 (73%), Positives = 29/34 (85%) Frame = +1 Query: 238 TRIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339 TR+I+DRETGRSRGFGF+ F S E A SAIQA+D Sbjct: 69 TRVILDRETGRSRGFGFVTFTSSEAASSAIQALD 102 >ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max] Length = 245 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = +1 Query: 241 RIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339 ++IMDRETGRSRGFGFI FA+ E+A SAIQ MD Sbjct: 70 KVIMDRETGRSRGFGFITFATSEDASSAIQGMD 102 >gb|AFK35450.1| unknown [Medicago truncatula] Length = 176 Score = 54.7 bits (130), Expect = 8e-06 Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = +1 Query: 241 RIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339 +IIMDR+TGRSRGFGFI FA+ E A SA+QAMD Sbjct: 70 KIIMDRDTGRSRGFGFITFATSEEASSALQAMD 102 >ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max] Length = 244 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/33 (72%), Positives = 29/33 (87%) Frame = +1 Query: 241 RIIMDRETGRSRGFGFIEFASQENAQSAIQAMD 339 ++IMDRETGRSRGFGF+ FA+ E+A SAIQ MD Sbjct: 70 KVIMDRETGRSRGFGFVTFATSEDASSAIQGMD 102