BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040739
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090428.1| orf1 gene product (mitochondrion) [Boea hygr...   137   9e-31
ref|XP_002532794.1| conserved hypothetical protein [Ricinus comm...    98   6e-19
gb|AFI44296.1| transport membrane protein, partial (mitochondrio...    90   2e-16
ref|YP_004935343.1| transport membrane protein, partial (mitocho...    90   2e-16
gb|AEN56110.1| transport membrane protein [Cucumis melo subsp. m...    55   5e-13

>ref|YP_005090428.1| orf1 gene product (mitochondrion) [Boea hygrometrica]
           gi|340549501|gb|AEK53322.1| hypothetical protein
           (mitochondrion) [Boea hygrometrica]
          Length = 331

 Score =  137 bits (345), Expect = 9e-31
 Identities = 77/95 (81%), Positives = 79/95 (83%), Gaps = 5/95 (5%)
 Frame = -3

Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMRESGSID-KRGVAPLEPGKV----TLN 106
           Q+VARFLIS IIELAI VASIVQVREEGWTSGMRESGSID KR VAPLEPGKV     +N
Sbjct: 234 QIVARFLISLIIELAIFVASIVQVREEGWTSGMRESGSIDKKRRVAPLEPGKVIINININ 293

Query: 105 EFPSNSQPTYAIHSRKD*KTQKTPYRRSEMSDTSG 1
           EF SNSQPT  IHSRKD  TQKTPY RS MSDTSG
Sbjct: 294 EFQSNSQPTDVIHSRKDYNTQKTPYLRSGMSDTSG 328


>ref|XP_002532794.1| conserved hypothetical protein [Ricinus communis]
           gi|223527454|gb|EEF29587.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/75 (69%), Positives = 58/75 (77%)
 Frame = -3

Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMRESGSIDKRGVAPLEPGKVTLNEFPSN 91
           Q+VAR  IS I ELAI VASI+QV  EGWTSGMRESGSI+KR +AP E  KVT+NE  SN
Sbjct: 34  QIVARLFISLIKELAIFVASIIQVHGEGWTSGMRESGSINKRIIAPPELAKVTINEISSN 93

Query: 90  SQPTYAIHSRKD*KT 46
           SQPTYAI+ R D  T
Sbjct: 94  SQPTYAIYPRTDYNT 108


>gb|AFI44296.1| transport membrane protein, partial (mitochondrion) [Silene
           vulgaris]
          Length = 290

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/64 (73%), Positives = 52/64 (81%)
 Frame = -3

Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMRESGSIDKRGVAPLEPGKVTLNEFPSN 91
           Q++ARFL+S IIELAI VASIVQVREEGWTSGM  SG   KR V PLEPGK  +NEFP+N
Sbjct: 219 QIIARFLLSLIIELAIFVASIVQVREEGWTSGM--SGRSTKRRVVPLEPGKGIINEFPNN 276

Query: 90  SQPT 79
            QPT
Sbjct: 277 YQPT 280


>ref|YP_004935343.1| transport membrane protein, partial (mitochondrion) [Silene
           vulgaris] gi|344228007|gb|AEM46192.1| transport membrane
           protein, partial (mitochondrion) [Silene vulgaris]
          Length = 290

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/64 (73%), Positives = 52/64 (81%)
 Frame = -3

Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMRESGSIDKRGVAPLEPGKVTLNEFPSN 91
           Q++ARFL+S IIELAI VASIVQVREEGWTSGM  SG   KR V PLEPGK  +NEFP+N
Sbjct: 219 QIIARFLLSLIIELAIFVASIVQVREEGWTSGM--SGRSTKRRVVPLEPGKGIINEFPNN 276

Query: 90  SQPT 79
            QPT
Sbjct: 277 YQPT 280


>gb|AEN56110.1| transport membrane protein [Cucumis melo subsp. melo]
          Length = 330

 Score = 55.5 bits (132), Expect(2) = 5e-13
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -3

Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMR 169
           Q+VA FLIS I+ELAI VASIVQVR EGWTSGMR
Sbjct: 246 QIVAPFLISLILELAIFVASIVQVRSEGWTSGMR 279



 Score = 43.5 bits (101), Expect(2) = 5e-13
 Identities = 22/44 (50%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
 Frame = -2

Query: 178 WNEGERL-------DRQKRSSPPRTWQSNSQ*IPEQFSTNICDS 68
           W  G RL        R+K+   PRTWQS+ Q IPEQ ST IC S
Sbjct: 274 WTSGMRLRKELTARSRKKKRGTPRTWQSHYQFIPEQLSTKICSS 317