BLASTX nr result
ID: Coptis21_contig00040739
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00040739 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_005090428.1| orf1 gene product (mitochondrion) [Boea hygr... 137 9e-31 ref|XP_002532794.1| conserved hypothetical protein [Ricinus comm... 98 6e-19 gb|AFI44296.1| transport membrane protein, partial (mitochondrio... 90 2e-16 ref|YP_004935343.1| transport membrane protein, partial (mitocho... 90 2e-16 gb|AEN56110.1| transport membrane protein [Cucumis melo subsp. m... 55 5e-13 >ref|YP_005090428.1| orf1 gene product (mitochondrion) [Boea hygrometrica] gi|340549501|gb|AEK53322.1| hypothetical protein (mitochondrion) [Boea hygrometrica] Length = 331 Score = 137 bits (345), Expect = 9e-31 Identities = 77/95 (81%), Positives = 79/95 (83%), Gaps = 5/95 (5%) Frame = -3 Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMRESGSID-KRGVAPLEPGKV----TLN 106 Q+VARFLIS IIELAI VASIVQVREEGWTSGMRESGSID KR VAPLEPGKV +N Sbjct: 234 QIVARFLISLIIELAIFVASIVQVREEGWTSGMRESGSIDKKRRVAPLEPGKVIINININ 293 Query: 105 EFPSNSQPTYAIHSRKD*KTQKTPYRRSEMSDTSG 1 EF SNSQPT IHSRKD TQKTPY RS MSDTSG Sbjct: 294 EFQSNSQPTDVIHSRKDYNTQKTPYLRSGMSDTSG 328 >ref|XP_002532794.1| conserved hypothetical protein [Ricinus communis] gi|223527454|gb|EEF29587.1| conserved hypothetical protein [Ricinus communis] Length = 108 Score = 98.2 bits (243), Expect = 6e-19 Identities = 52/75 (69%), Positives = 58/75 (77%) Frame = -3 Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMRESGSIDKRGVAPLEPGKVTLNEFPSN 91 Q+VAR IS I ELAI VASI+QV EGWTSGMRESGSI+KR +AP E KVT+NE SN Sbjct: 34 QIVARLFISLIKELAIFVASIIQVHGEGWTSGMRESGSINKRIIAPPELAKVTINEISSN 93 Query: 90 SQPTYAIHSRKD*KT 46 SQPTYAI+ R D T Sbjct: 94 SQPTYAIYPRTDYNT 108 >gb|AFI44296.1| transport membrane protein, partial (mitochondrion) [Silene vulgaris] Length = 290 Score = 89.7 bits (221), Expect = 2e-16 Identities = 47/64 (73%), Positives = 52/64 (81%) Frame = -3 Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMRESGSIDKRGVAPLEPGKVTLNEFPSN 91 Q++ARFL+S IIELAI VASIVQVREEGWTSGM SG KR V PLEPGK +NEFP+N Sbjct: 219 QIIARFLLSLIIELAIFVASIVQVREEGWTSGM--SGRSTKRRVVPLEPGKGIINEFPNN 276 Query: 90 SQPT 79 QPT Sbjct: 277 YQPT 280 >ref|YP_004935343.1| transport membrane protein, partial (mitochondrion) [Silene vulgaris] gi|344228007|gb|AEM46192.1| transport membrane protein, partial (mitochondrion) [Silene vulgaris] Length = 290 Score = 89.7 bits (221), Expect = 2e-16 Identities = 47/64 (73%), Positives = 52/64 (81%) Frame = -3 Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMRESGSIDKRGVAPLEPGKVTLNEFPSN 91 Q++ARFL+S IIELAI VASIVQVREEGWTSGM SG KR V PLEPGK +NEFP+N Sbjct: 219 QIIARFLLSLIIELAIFVASIVQVREEGWTSGM--SGRSTKRRVVPLEPGKGIINEFPNN 276 Query: 90 SQPT 79 QPT Sbjct: 277 YQPT 280 >gb|AEN56110.1| transport membrane protein [Cucumis melo subsp. melo] Length = 330 Score = 55.5 bits (132), Expect(2) = 5e-13 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = -3 Query: 270 QVVARFLISSIIELAISVASIVQVREEGWTSGMR 169 Q+VA FLIS I+ELAI VASIVQVR EGWTSGMR Sbjct: 246 QIVAPFLISLILELAIFVASIVQVRSEGWTSGMR 279 Score = 43.5 bits (101), Expect(2) = 5e-13 Identities = 22/44 (50%), Positives = 25/44 (56%), Gaps = 7/44 (15%) Frame = -2 Query: 178 WNEGERL-------DRQKRSSPPRTWQSNSQ*IPEQFSTNICDS 68 W G RL R+K+ PRTWQS+ Q IPEQ ST IC S Sbjct: 274 WTSGMRLRKELTARSRKKKRGTPRTWQSHYQFIPEQLSTKICSS 317