BLASTX nr result

ID: Coptis21_contig00040720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040720
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25448.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 1...   169   2e-40
emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]   169   2e-40
ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus ...   158   5e-37

>emb|CBI25448.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  169 bits (429), Expect = 2e-40
 Identities = 86/92 (93%), Positives = 91/92 (98%)
 Frame = -1

Query: 277 RQATYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSTHDPRIQENAVTALLNLSIFDNNKV 98
           RQA YELRLLAKTGMDNRRIIAEAGAIPFLVTLLS+HDPRIQENAVTALLNLSIFDNNK+
Sbjct: 244 RQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKI 303

Query: 97  LIMAAGAIDNVIEVLQSGKTMEARENAAAAIF 2
           LIMAAGAIDN+++VLQSGKTMEARENAAAAIF
Sbjct: 304 LIMAAGAIDNIVDVLQSGKTMEARENAAAAIF 335


>ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 13 [Vitis vinifera]
          Length = 688

 Score =  169 bits (429), Expect = 2e-40
 Identities = 86/92 (93%), Positives = 91/92 (98%)
 Frame = -1

Query: 277 RQATYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSTHDPRIQENAVTALLNLSIFDNNKV 98
           RQA YELRLLAKTGMDNRRIIAEAGAIPFLVTLLS+HDPRIQENAVTALLNLSIFDNNK+
Sbjct: 414 RQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKI 473

Query: 97  LIMAAGAIDNVIEVLQSGKTMEARENAAAAIF 2
           LIMAAGAIDN+++VLQSGKTMEARENAAAAIF
Sbjct: 474 LIMAAGAIDNIVDVLQSGKTMEARENAAAAIF 505


>emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]
          Length = 668

 Score =  169 bits (429), Expect = 2e-40
 Identities = 86/92 (93%), Positives = 91/92 (98%)
 Frame = -1

Query: 277 RQATYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSTHDPRIQENAVTALLNLSIFDNNKV 98
           RQA YELRLLAKTGMDNRRIIAEAGAIPFLVTLLS+HDPRIQENAVTALLNLSIFDNNK+
Sbjct: 414 RQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKI 473

Query: 97  LIMAAGAIDNVIEVLQSGKTMEARENAAAAIF 2
           LIMAAGAIDN+++VLQSGKTMEARENAAAAIF
Sbjct: 474 LIMAAGAIDNIVDVLQSGKTMEARENAAAAIF 505


>ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|222851063|gb|EEE88610.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/92 (88%), Positives = 88/92 (95%)
 Frame = -1

Query: 277 RQATYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSTHDPRIQENAVTALLNLSIFDNNKV 98
           RQA YELRLLAKTGMDNR+IIAEAGAIPFLVTLLS+ DPRIQENAVTALLNLSIFDNNK+
Sbjct: 414 RQAAYELRLLAKTGMDNRKIIAEAGAIPFLVTLLSSTDPRIQENAVTALLNLSIFDNNKI 473

Query: 97  LIMAAGAIDNVIEVLQSGKTMEARENAAAAIF 2
           LIMAAG+ID++I VL+SGKTMEARENAAA IF
Sbjct: 474 LIMAAGSIDSIINVLESGKTMEARENAAATIF 505


>ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532277|gb|EEF34080.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 695

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/92 (88%), Positives = 87/92 (94%)
 Frame = -1

Query: 277 RQATYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSTHDPRIQENAVTALLNLSIFDNNKV 98
           RQA YELRLLAKTGMDNRRIIAEAGAIPFLV LLS+ DPRIQENAVTALLNLSIFDNNK+
Sbjct: 421 RQAAYELRLLAKTGMDNRRIIAEAGAIPFLVILLSSKDPRIQENAVTALLNLSIFDNNKI 480

Query: 97  LIMAAGAIDNVIEVLQSGKTMEARENAAAAIF 2
           LIMAAGAID+++ VL+SG TMEARENAAAAIF
Sbjct: 481 LIMAAGAIDSIVNVLESGNTMEARENAAAAIF 512


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