BLASTX nr result
ID: Coptis21_contig00040707
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00040707 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [S... 115 3e-24 gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays] 112 2e-23 ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group] g... 106 2e-21 gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indi... 106 2e-21 gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu... 105 3e-21 >ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor] gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor] Length = 590 Score = 115 bits (289), Expect = 3e-24 Identities = 55/93 (59%), Positives = 69/93 (74%) Frame = -3 Query: 303 MISAYGKNGQVELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPD 124 M+S YGK G +E RE+F RMPER LVSW AMID V +G FSEAL +FD M +G KPD Sbjct: 155 MVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPD 214 Query: 123 AMTLVSVLKASGNLGALDKGKWVHRYVDENKLG 25 A+ LVSVLK +LGAL++G+WVHR++ +LG Sbjct: 215 AVVLVSVLKTCAHLGALERGRWVHRFLKAERLG 247 >gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays] Length = 625 Score = 112 bits (281), Expect = 2e-23 Identities = 53/93 (56%), Positives = 68/93 (73%) Frame = -3 Query: 303 MISAYGKNGQVELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPD 124 M+S YGK G +E RE+F RMPER LVSW AMID + +G FSEAL +FD M +G +PD Sbjct: 190 MVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPD 249 Query: 123 AMTLVSVLKASGNLGALDKGKWVHRYVDENKLG 25 A+ L SVLKA +LGAL++G+WVHR++ LG Sbjct: 250 AVVLSSVLKACAHLGALERGRWVHRFLKAEGLG 282 >ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group] gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group] gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group] gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group] Length = 586 Score = 106 bits (265), Expect = 2e-21 Identities = 49/93 (52%), Positives = 65/93 (69%) Frame = -3 Query: 303 MISAYGKNGQVELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPD 124 M+S YGK G + RE+F RMPER+LVSW AM+D V +G F EAL +FD M +PD Sbjct: 151 MVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPD 210 Query: 123 AMTLVSVLKASGNLGALDKGKWVHRYVDENKLG 25 + LVSVLKA +LGA+++G+WVHRY++ G Sbjct: 211 VVVLVSVLKACAHLGAVERGRWVHRYLETGSFG 243 >gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group] Length = 629 Score = 106 bits (265), Expect = 2e-21 Identities = 49/93 (52%), Positives = 65/93 (69%) Frame = -3 Query: 303 MISAYGKNGQVELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPD 124 M+S YGK G + RE+F RMPER+LVSW AM+D V +G F EAL +FD M +PD Sbjct: 151 MVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPD 210 Query: 123 AMTLVSVLKASGNLGALDKGKWVHRYVDENKLG 25 + LVSVLKA +LGA+++G+WVHRY++ G Sbjct: 211 VVVLVSVLKACAHLGAVERGRWVHRYLETGSFG 243 >gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum] gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum] Length = 532 Score = 105 bits (263), Expect = 3e-21 Identities = 49/90 (54%), Positives = 65/90 (72%) Frame = -3 Query: 303 MISAYGKNGQVELGRELFERMPERSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPD 124 +I+ Y K+G VE RELF++MPER+ VSW AMI GYV G F EAL LF+D+Q++GL+P+ Sbjct: 180 LINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPN 239 Query: 123 AMTLVSVLKASGNLGALDKGKWVHRYVDEN 34 +V L A LG+LD G+W+H YVD N Sbjct: 240 HAGIVGALTACSYLGSLDHGRWIHAYVDRN 269