BLASTX nr result

ID: Coptis21_contig00040699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040699
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27927.3| unnamed protein product [Vitis vinifera]               98   8e-19
ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262...    98   8e-19
ref|XP_002514143.1| conserved hypothetical protein [Ricinus comm...    96   2e-18
ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002867402.1| hypothetical protein ARALYDRAFT_491802 [Arab...    68   9e-10

>emb|CBI27927.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/114 (45%), Positives = 67/114 (58%)
 Frame = -3

Query: 344 WVPLFHIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVTIINSSSTPL 165
           WVPLF IF+NSP+PE EAS W Q                      KP D  + +SSS   
Sbjct: 4   WVPLFDIFMNSPSPEFEASLWLQQSFNASSATTITTGSFLSLLT-KPCDAVVSDSSSPS- 61

Query: 164 PAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELSSLANNILKENQELDF 3
               +K VMW+QTLPN VQ RILSFL +E++RFC ++LS LA N+L  + E++F
Sbjct: 62  ----TKRVMWVQTLPNVVQSRILSFLALEKQRFCSRDLSRLARNVLSGDGEVEF 111


>ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262802 [Vitis vinifera]
          Length = 491

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/114 (45%), Positives = 67/114 (58%)
 Frame = -3

Query: 344 WVPLFHIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVTIINSSSTPL 165
           WVPLF IF+NSP+PE EAS W Q                      KP D  + +SSS   
Sbjct: 4   WVPLFDIFMNSPSPEFEASLWLQQSFNASSATTITTGSFLSLLT-KPCDAVVSDSSSPS- 61

Query: 164 PAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELSSLANNILKENQELDF 3
               +K VMW+QTLPN VQ RILSFL +E++RFC ++LS LA N+L  + E++F
Sbjct: 62  ----TKRVMWVQTLPNVVQSRILSFLALEKQRFCSRDLSRLARNVLSGDGEVEF 111


>ref|XP_002514143.1| conserved hypothetical protein [Ricinus communis]
           gi|223546599|gb|EEF48097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/114 (47%), Positives = 68/114 (59%)
 Frame = -3

Query: 344 WVPLFHIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVTIINSSSTPL 165
           W+PLF IFLNS TPE+EAS W                       +KPI+ +I +SS    
Sbjct: 4   WIPLFDIFLNSSTPETEASIWLNQSFSASSPSSPITTASFLSLLTKPINASITSSSP--- 60

Query: 164 PAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELSSLANNILKENQELDF 3
           PA  +K +M+IQTLP+ VQ RILSFL  E  RFCK++LS LA NIL +N  +DF
Sbjct: 61  PA--TKRIMFIQTLPDMVQSRILSFLAFEHERFCKRKLSRLATNILTDNLGIDF 112


>ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|222854273|gb|EEE91820.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/114 (43%), Positives = 66/114 (57%)
 Frame = -3

Query: 344 WVPLFHIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVTIINSSSTPL 165
           WVPLF+IFLNSPTPE+EAS W +                        +   IIN+SST  
Sbjct: 4   WVPLFNIFLNSPTPETEASLWLEQSSSSSSVPITTTSFLSL------LAEPIINNSST-- 55

Query: 164 PAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELSSLANNILKENQELDF 3
               ++ VM++QTLP  VQ RILSFL  E +RFCK++LS LA  +L + + +DF
Sbjct: 56  ----NRRVMFLQTLPFLVQSRILSFLGFEHQRFCKRDLSKLARTLLTDTEGIDF 105


>ref|XP_002867402.1| hypothetical protein ARALYDRAFT_491802 [Arabidopsis lyrata subsp.
           lyrata] gi|297313238|gb|EFH43661.1| hypothetical protein
           ARALYDRAFT_491802 [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/106 (38%), Positives = 55/106 (51%)
 Frame = -3

Query: 344 WVPLFHIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVTIINSSSTPL 165
           W+PL  IFL SP+PE+EAS W                          +      +SS   
Sbjct: 4   WIPLLDIFLKSPSPETEASLWLDQASNSSSSSSSAAAPINRSSFVSLLKKQCDQNSS--- 60

Query: 164 PAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELSSLANNIL 27
           PA  +K V++I+TLPN VQ +ILSFLR+E +RFC  +L  LA  +L
Sbjct: 61  PA--TKKVLFIETLPNMVQSKILSFLRLEYQRFCVSDLVWLAREML 104


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