BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040695
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]    80   1e-13
emb|CBI26492.3| unnamed protein product [Vitis vinifera]               77   1e-12
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...    77   2e-12
emb|CAN75536.1| hypothetical protein VITISV_009641 [Vitis vinifera]    76   3e-12
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat...    76   3e-12

>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 6/92 (6%)
 Frame = +2

Query: 20   ESPRSV------DGYSSNSSTPAPPPRKTRRVAEIYETCNFTYAEPACFEEVATQQVWVM 181
            ESPRSV      +  +S SS+P+  PRK R + ++YE CN    EP  FEE    + W  
Sbjct: 858  ESPRSVPLSPSIESPTSXSSSPSSTPRKMRSLTDVYERCNLCIVEPQSFEEAIKDEDWRK 917

Query: 182  AMQEEINMIQKNQT*ELVDRPEGRDIIGVNLV 277
            AM++EI++I+KN+T +LV++P+ ++IIGV  +
Sbjct: 918  AMEKEIDVIEKNETWQLVEKPKDKEIIGVKWI 949


>emb|CBI26492.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/92 (40%), Positives = 61/92 (66%), Gaps = 6/92 (6%)
 Frame = +2

Query: 20  ESPRSV------DGYSSNSSTPAPPPRKTRRVAEIYETCNFTYAEPACFEEVATQQVWVM 181
           +SPRSV      +  +S+SS+P+  PRK R ++++Y+ CN    EP  FEE    + W  
Sbjct: 684 DSPRSVPLSSSTESPTSSSSSPSSTPRKMRSLSDVYKRCNLCIVEPQSFEEAIKDEDWRK 743

Query: 182 AMQEEINMIQKNQT*ELVDRPEGRDIIGVNLV 277
           AM++EI++I+KN+T +LV++P  ++IIGV  +
Sbjct: 744 AMEKEIDVIEKNETWQLVEKPIDKEIIGVKWI 775


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 20/114 (17%)
 Frame = +2

Query: 17   PESPRSVDGYSSNSS--------TPAPPPRKTRRVAEIYET------------CNFTYAE 136
            P SP S    SS+SS        TP   PR+ R + E+ E+            CN++  E
Sbjct: 786  PSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVE 845

Query: 137  PACFEEVATQQVWVMAMQEEINMIQKNQT*ELVDRPEGRDIIGVNLVL*MHLTP 298
            P  F+E      W+ AM++EI+MI+KN T ELVDRP  R++IGV  V    L P
Sbjct: 846  PQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNP 899


>emb|CAN75536.1| hypothetical protein VITISV_009641 [Vitis vinifera]
          Length = 790

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 38/89 (42%), Positives = 52/89 (58%)
 Frame = +2

Query: 11  TTPESPRSVDGYSSNSSTPAPPPRKTRRVAEIYETCNFTYAEPACFEEVATQQVWVMAMQ 190
           T P+ P   +      +    P R TR + EIYE C+    EP C++E A +  W +AM+
Sbjct: 249 TIPQIPXETEDEVGADNLDDVPVRGTRLLDEIYERCDVALQEPTCYDETAKENGWRVAME 308

Query: 191 EEINMIQKNQT*ELVDRPEGRDIIGVNLV 277
           EE+ MI+KN T ELVDRP+ + IIGV  V
Sbjct: 309 EELKMIKKNGTWELVDRPKNQKIIGVKWV 337


>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108708461|gb|ABF96256.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1167

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 20/106 (18%)
 Frame = +2

Query: 17  PESPRSVDGYSSNSS--------TPAPPPRKTRRVAEIYET------------CNFTYAE 136
           P SP S    SS+SS        TP   PR+ R + E+ E+            CN++  E
Sbjct: 660 PSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVE 719

Query: 137 PACFEEVATQQVWVMAMQEEINMIQKNQT*ELVDRPEGRDIIGVNL 274
           P  F+E      W+ AM++EI+MI+KN T ELVDRP  R++IGV L
Sbjct: 720 PQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKL 765