BLASTX nr result

ID: Coptis21_contig00040690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040690
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36080.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Viti...   167   1e-39
ref|XP_002324216.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002333688.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002308598.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39

>emb|CBI36080.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  167 bits (422), Expect = 1e-39
 Identities = 74/99 (74%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
 Frame = -3

Query: 299 GDGRKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHSNS 120
           GDGRKCLHC ++KTPQWRTGP+GPKTLCNACGVRFKSGRLVPEYRPA+SPTFV AKHSNS
Sbjct: 174 GDGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPASSPTFVSAKHSNS 233

Query: 119 HRKVMELRRKKEMMRSDHEQFLYPNAMYGVSGG-DYLVH 6
           HRKV+ELRR+K++ RS H QFL   +++  + G DYL+H
Sbjct: 234 HRKVLELRRQKDLQRSHHHQFLGQTSIFSATNGDDYLIH 272


>ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
          Length = 329

 Score =  167 bits (422), Expect = 1e-39
 Identities = 74/99 (74%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
 Frame = -3

Query: 299 GDGRKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHSNS 120
           GDGRKCLHC ++KTPQWRTGP+GPKTLCNACGVRFKSGRLVPEYRPA+SPTFV AKHSNS
Sbjct: 220 GDGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPASSPTFVSAKHSNS 279

Query: 119 HRKVMELRRKKEMMRSDHEQFLYPNAMYGVSGG-DYLVH 6
           HRKV+ELRR+K++ RS H QFL   +++  + G DYL+H
Sbjct: 280 HRKVLELRRQKDLQRSHHHQFLGQTSIFSATNGDDYLIH 318


>ref|XP_002324216.1| predicted protein [Populus trichocarpa] gi|222865650|gb|EEF02781.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/106 (73%), Positives = 92/106 (86%), Gaps = 8/106 (7%)
 Frame = -3

Query: 296 DGRKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHSNSH 117
           DGRKCLHC +DKTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPAASPTF+L KHSNSH
Sbjct: 205 DGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMLTKHSNSH 264

Query: 116 RKVMELRRKKEMMRS----DHEQFL--YPNAMYGVSGG--DYLVHR 3
           RKV+ELRR+KEM+R+     H+QFL  + N ++GVS G  DYL+H+
Sbjct: 265 RKVLELRRQKEMVRAQQQHQHQQFLHHHQNMVFGVSNGGDDYLIHQ 310


>ref|XP_002333688.1| predicted protein [Populus trichocarpa] gi|222838294|gb|EEE76659.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/106 (73%), Positives = 92/106 (86%), Gaps = 8/106 (7%)
 Frame = -3

Query: 296 DGRKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHSNSH 117
           DGRKCLHC +DKTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPAASPTF+L KHSNSH
Sbjct: 149 DGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMLTKHSNSH 208

Query: 116 RKVMELRRKKEMMRS----DHEQFL--YPNAMYGVSGG--DYLVHR 3
           RKV+ELRR+KEM+R+     H+QFL  + N ++GVS G  DYL+H+
Sbjct: 209 RKVLELRRQKEMVRAQQQHQHQQFLHHHQNMVFGVSNGGDDYLIHQ 254


>ref|XP_002308598.1| predicted protein [Populus trichocarpa] gi|222854574|gb|EEE92121.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/109 (71%), Positives = 92/109 (84%), Gaps = 8/109 (7%)
 Frame = -3

Query: 305 EHGDGRKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHS 126
           E GDGRKCLHC +DKTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPAASPTF+L KHS
Sbjct: 239 EGGDGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMLTKHS 298

Query: 125 NSHRKVMELRRKKEMMRS----DHEQFL--YPNAMYGVSGG--DYLVHR 3
           NSHRKV+ELRR+KEM+R+     H Q+L  + N ++ VS G  DYL+H+
Sbjct: 299 NSHRKVLELRRQKEMVRAQQQHQHHQYLHHHQNMVFDVSNGGDDYLIHQ 347


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