BLASTX nr result

ID: Coptis21_contig00040689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040689
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95863.1| retrotransposon protein, putative, unclassified [...    77   2e-12
ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788...    76   3e-12
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]            76   3e-12
emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]    75   6e-12
emb|CAN67159.1| hypothetical protein VITISV_039497 [Vitis vinifera]    75   7e-12

>gb|AAX95863.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1126

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/91 (40%), Positives = 54/91 (59%)
 Frame = +2

Query: 2   KMITAKAMSKFFRKNTHALVGQIFSITATEIQPEVPVAVTSLLHEFADVFQEPNSLPPSR 181
           K +TAK +   F+    A V Q+ SI   E   ++P  ++++L E  D FQEP+ LPP R
Sbjct: 571 KSVTAKQLKGMFKSRAIAQVVQLCSIEEIETNEQLPPEISAVLQESQDQFQEPSRLPPHR 630

Query: 182 TLDHHIPLKPNSEPTNQRPYKQPYIQKAVLE 274
             DH+IPL PN++P N +PY+    QK  +E
Sbjct: 631 DFDHNIPLMPNAKPVNAKPYRYAPKQKDEIE 661


>ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
          Length = 1433

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 30/59 (50%), Positives = 46/59 (77%)
 Frame = +2

Query: 113 AVTSLLHEFADVFQEPNSLPPSRTLDHHIPLKPNSEPTNQRPYKQPYIQKAVLESLMAE 289
           A+ +L+H++  +FQ P +LPPSR++DHHI L+PN+EP N RPY+ P+ QKA +E  +A+
Sbjct: 522 AIDALIHKYQSLFQTPTALPPSRSIDHHIHLRPNTEPINVRPYRYPHFQKAEIEKQVAD 580


>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
          Length = 1434

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = +2

Query: 5   MITAKAMSKFFRKNTHALVGQIFSITATEIQPEVPV--AVTSLLHEFADVFQEPNSLPPS 178
           +I  + M+K   KN    V ++ ++   E++  VPV  +V ++L  FA+VF EP  LPP 
Sbjct: 571 LIKFEKMNKMLDKNVMGFVIEVHTLKTLEME-NVPVLDSVATILAGFAEVFAEPKGLPPR 629

Query: 179 RTLDHHIPLKPNSEPTNQRPYKQPYIQKAVLESLMAE 289
           R  DH IPLK  +EP NQRPY+ P+ QK  +E ++ E
Sbjct: 630 RECDHAIPLKMGAEPPNQRPYRVPHQQKNAMEEIIKE 666


>emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]
          Length = 793

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/91 (39%), Positives = 56/91 (61%)
 Frame = +2

Query: 2   KMITAKAMSKFFRKNTHALVGQIFSITATEIQPEVPVAVTSLLHEFADVFQEPNSLPPSR 181
           ++ + KA+SK  R+ + ++       T+ E+Q  + + +  L+  F D+FQEPN LPP+R
Sbjct: 430 QVASLKAVSKELRQGS-SMFAICLQSTSNEVQQAIHLDMQQLIKAFEDIFQEPNQLPPAR 488

Query: 182 TLDHHIPLKPNSEPTNQRPYKQPYIQKAVLE 274
            +DH I LK  +EP N RPY+  Y QKA +E
Sbjct: 489 EVDHRITLKEGTEPVNVRPYRYAYFQKAEIE 519


>emb|CAN67159.1| hypothetical protein VITISV_039497 [Vitis vinifera]
          Length = 711

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/91 (39%), Positives = 55/91 (60%)
 Frame = +2

Query: 2   KMITAKAMSKFFRKNTHALVGQIFSITATEIQPEVPVAVTSLLHEFADVFQEPNSLPPSR 181
           ++ + K +SK  R+ +      + S T+ E+Q  + + +  L+  F D+FQEPN LPP+R
Sbjct: 301 QVASLKVVSKELRQGSSMFAIYLQS-TSNEVQQAIHLDIQQLIKAFEDIFQEPNQLPPAR 359

Query: 182 TLDHHIPLKPNSEPTNQRPYKQPYIQKAVLE 274
            +DH I LK  +EP N RPY+  Y QKA +E
Sbjct: 360 EIDHQITLKEGTEPVNVRPYRYAYFQKAEIE 390


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