BLASTX nr result

ID: Coptis21_contig00040657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040657
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18971.3| unnamed protein product [Vitis vinifera]              112   3e-23
ref|XP_002284603.1| PREDICTED: uncharacterized amino-acid permea...   111   7e-23
ref|XP_002520314.1| GABA-specific permease, putative [Ricinus co...   108   3e-22
ref|XP_002309938.1| amino acid transporter [Populus trichocarpa]...   108   5e-22
emb|CBI21593.3| unnamed protein product [Vitis vinifera]              102   3e-20

>emb|CBI18971.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/82 (70%), Positives = 63/82 (76%)
 Frame = -1

Query: 247 LCKQAIAAMESRETHLNGHKQAFEMDPGEKRLNELGYKQELRREMTMFKTLAITFSVMAI 68
           L +Q + AM+      N    A EMD GEKRLNELGYKQELRREMT+FKTLAITFS MA+
Sbjct: 56  LHQQTVVAMKV----FNAESGALEMDSGEKRLNELGYKQELRREMTLFKTLAITFSSMAV 111

Query: 67  FPGTPLYGSSLLYAGPASLIWG 2
           F GTPLYGS L YAGPASLIWG
Sbjct: 112 FTGTPLYGSCLRYAGPASLIWG 133


>ref|XP_002284603.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c [Vitis
           vinifera]
          Length = 522

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/66 (81%), Positives = 56/66 (84%)
 Frame = -1

Query: 199 NGHKQAFEMDPGEKRLNELGYKQELRREMTMFKTLAITFSVMAIFPGTPLYGSSLLYAGP 20
           N    A EMD GEKRLNELGYKQELRREMT+FKTLAITFS MA+F GTPLYGS L YAGP
Sbjct: 5   NAESGALEMDSGEKRLNELGYKQELRREMTLFKTLAITFSSMAVFTGTPLYGSCLRYAGP 64

Query: 19  ASLIWG 2
           ASLIWG
Sbjct: 65  ASLIWG 70


>ref|XP_002520314.1| GABA-specific permease, putative [Ricinus communis]
           gi|223540533|gb|EEF42100.1| GABA-specific permease,
           putative [Ricinus communis]
          Length = 527

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/74 (70%), Positives = 58/74 (78%)
 Frame = -1

Query: 223 MESRETHLNGHKQAFEMDPGEKRLNELGYKQELRREMTMFKTLAITFSVMAIFPGTPLYG 44
           M S   H    + A E D GEKRLNELGY+QELRR+MT+FKTLAITFS MA+F GTPLYG
Sbjct: 1   MASSRVHAGSSQTALETDSGEKRLNELGYQQELRRDMTLFKTLAITFSSMAVFTGTPLYG 60

Query: 43  SSLLYAGPASLIWG 2
            SL YAGPAS+IWG
Sbjct: 61  PSLRYAGPASMIWG 74


>ref|XP_002309938.1| amino acid transporter [Populus trichocarpa]
           gi|222852841|gb|EEE90388.1| amino acid transporter
           [Populus trichocarpa]
          Length = 538

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/63 (84%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
 Frame = -1

Query: 187 QAFEMDPGEKRLNELGYKQELRREMTMFKTLAITFSVMAIFPG-TPLYGSSLLYAGPASL 11
           Q  EMDPGEKRLNELGYKQELRREMT+FKTLAI+FS M +F G TPLYGSSLLYAGPASL
Sbjct: 10  QVQEMDPGEKRLNELGYKQELRREMTLFKTLAISFSTMTLFTGITPLYGSSLLYAGPASL 69

Query: 10  IWG 2
           +WG
Sbjct: 70  VWG 72


>emb|CBI21593.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -1

Query: 199 NGHKQAFEMDPGEKRLNELGYKQELRREMTMFKTLAITFSVMAIFPG-TPLYGSSLLYAG 23
           +G  +   MD GEKRLNELGYKQELRREMT+FKTLAI+FS M +F G TPLYGSSLLYAG
Sbjct: 3   HGQPRVGVMDSGEKRLNELGYKQELRREMTLFKTLAISFSTMTLFTGITPLYGSSLLYAG 62

Query: 22  PASLIWG 2
           PA+L+WG
Sbjct: 63  PATLVWG 69


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