BLASTX nr result

ID: Coptis21_contig00040645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040645
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319014.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
gb|ABW75772.2| lipoxygenase [Camellia sinensis]                        72   6e-11
emb|CAD10740.1| lipoxygenase [Corylus avellana]                        72   6e-11
ref|XP_002328567.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
gb|AAG00881.1|AC064840_12 lipoxygenase - partial coding sequence...    69   4e-10

>ref|XP_002319014.1| predicted protein [Populus trichocarpa] gi|222857390|gb|EEE94937.1|
           predicted protein [Populus trichocarpa]
          Length = 871

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/69 (59%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
 Frame = -2

Query: 201 FFQLRDLIKG-RDGKNRLE-GGTSVKKIEGSVLLMKKNVLDFNDFHATVVDNVNEFLGRR 28
           F  + D I G  DG  +L+ G    KKI+G+V+LMKKNVL FNDFHA+V+D V+E LG+R
Sbjct: 2   FQNIIDAITGDSDGSKKLKCGDGECKKIKGTVVLMKKNVLGFNDFHASVLDRVHELLGQR 61

Query: 27  VSLQLVSAV 1
           VSLQL+SAV
Sbjct: 62  VSLQLISAV 70


>gb|ABW75772.2| lipoxygenase [Camellia sinensis]
          Length = 861

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/60 (60%), Positives = 48/60 (80%)
 Frame = -2

Query: 180 IKGRDGKNRLEGGTSVKKIEGSVLLMKKNVLDFNDFHATVVDNVNEFLGRRVSLQLVSAV 1
           IKG DG +        KKI+G+V+LMKKNVLDFNDF+A+++D V+E LG++VSLQL+SAV
Sbjct: 9   IKGNDGND--------KKIKGTVVLMKKNVLDFNDFNASILDRVHELLGQKVSLQLISAV 60


>emb|CAD10740.1| lipoxygenase [Corylus avellana]
          Length = 873

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/60 (60%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
 Frame = -2

Query: 168 DGKNRLEGGTSV----KKIEGSVLLMKKNVLDFNDFHATVVDNVNEFLGRRVSLQLVSAV 1
           DG  +++  T+     +KIEGSV+LMKKNVLDFNDF+A+V+D V+E LG++VSLQL+SAV
Sbjct: 14  DGNKKMKRETAAAEKCRKIEGSVVLMKKNVLDFNDFNASVLDRVHELLGQKVSLQLISAV 73


>ref|XP_002328567.1| predicted protein [Populus trichocarpa] gi|222838282|gb|EEE76647.1|
           predicted protein [Populus trichocarpa]
          Length = 847

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/45 (75%), Positives = 43/45 (95%)
 Frame = -2

Query: 135 VKKIEGSVLLMKKNVLDFNDFHATVVDNVNEFLGRRVSLQLVSAV 1
           VKKI+G+V+LMKKNVLDFNDF+A+++D V+EFLG+ VSLQLVSAV
Sbjct: 2   VKKIKGTVVLMKKNVLDFNDFNASILDRVHEFLGQGVSLQLVSAV 46


>gb|AAG00881.1|AC064840_12 lipoxygenase - partial coding sequence [Arabidopsis thaliana]
          Length = 391

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/66 (53%), Positives = 52/66 (78%)
 Frame = -2

Query: 201 FFQLRDLIKGRDGKNRLEGGTSVKKIEGSVLLMKKNVLDFNDFHATVVDNVNEFLGRRVS 22
           F +LRDL+ G  G N     T+ KK++G+V+LMKKNVLDFNDF+A+ +D ++EFLG +++
Sbjct: 2   FGELRDLLTG--GGNE----TTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKIT 55

Query: 21  LQLVSA 4
           L+LVS+
Sbjct: 56  LRLVSS 61


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