BLASTX nr result

ID: Coptis21_contig00040643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040643
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...   176   2e-42
ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
emb|CBI32505.3| unnamed protein product [Vitis vinifera]              162   2e-38
ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...   162   2e-38
emb|CAH67471.1| H0805A05.1 [Oryza sativa Indica Group]                152   4e-35

>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score =  176 bits (446), Expect = 2e-42
 Identities = 77/103 (74%), Positives = 94/103 (91%)
 Frame = -2

Query: 311 DIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVL 132
           D+P+IT+IV+YKAPI+LFKGWHRL++DL+GR+GPF ETVC+PFAG  I+LWP  V+LA L
Sbjct: 197 DVPVITIIVVYKAPILLFKGWHRLIQDLIGRAGPFFETVCIPFAGFWILLWPIVVLLATL 256

Query: 131 VGIMSSLGFGCYAAVVAYQESSTKKGLLYVIASVSLFDEYTND 3
            GI+SS GFGCYAAVVAYQE+STK+GLLYV+AS S+FDEYTND
Sbjct: 257 AGIVSSFGFGCYAAVVAYQENSTKRGLLYVVASASVFDEYTND 299


>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  167 bits (424), Expect = 6e-40
 Identities = 76/103 (73%), Positives = 92/103 (89%)
 Frame = -2

Query: 311 DIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVL 132
           D+ +IT+IV+ KAP+ML KGWHRL++DL+GR GPFLETVCVPFA L I+LWP  V+LA+ 
Sbjct: 196 DVHVITMIVLLKAPLMLLKGWHRLIQDLIGREGPFLETVCVPFASLWILLWPIMVLLAIA 255

Query: 131 VGIMSSLGFGCYAAVVAYQESSTKKGLLYVIASVSLFDEYTND 3
            GI+SSLGFGC+AAVVAYQE+STK+GLLYVIAS S+FDEYTND
Sbjct: 256 AGIISSLGFGCFAAVVAYQENSTKRGLLYVIASASIFDEYTND 298


>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/103 (70%), Positives = 90/103 (87%)
 Frame = -2

Query: 311 DIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVL 132
           D+P ITLIV+YK+PI+LFKGW++L+ DL+GR GPF ET+CVPFAGLLI+LWP  VVLA L
Sbjct: 197 DVPFITLIVLYKSPILLFKGWNQLLHDLIGREGPFFETICVPFAGLLILLWPIVVVLAAL 256

Query: 131 VGIMSSLGFGCYAAVVAYQESSTKKGLLYVIASVSLFDEYTND 3
            G++SS  FGC AAV+AYQESS K+GLLY++AS+SLFDE TND
Sbjct: 257 AGVISSFFFGCCAAVIAYQESSIKRGLLYIVASMSLFDESTND 299


>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/103 (70%), Positives = 90/103 (87%)
 Frame = -2

Query: 311 DIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVL 132
           D+P ITLIV+YK+PI+LFKGW++L+ DL+GR GPF ET+CVPFAGLLI+LWP  VVLA L
Sbjct: 197 DVPFITLIVLYKSPILLFKGWNQLLHDLIGREGPFFETICVPFAGLLILLWPIVVVLAAL 256

Query: 131 VGIMSSLGFGCYAAVVAYQESSTKKGLLYVIASVSLFDEYTND 3
            G++SS  FGC AAV+AYQESS K+GLLY++AS+SLFDE TND
Sbjct: 257 AGVISSFFFGCCAAVIAYQESSIKRGLLYIVASMSLFDESTND 299


>emb|CAH67471.1| H0805A05.1 [Oryza sativa Indica Group]
          Length = 588

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/100 (70%), Positives = 83/100 (83%)
 Frame = -2

Query: 302 LITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVLVGI 123
           + TLI IYK P+MLFKGW RL++D++GR GPFLET CVPFAGL I+LWPFAVV AVL  I
Sbjct: 199 MFTLIAIYKCPVMLFKGWKRLIQDMIGREGPFLETACVPFAGLAILLWPFAVVGAVLASI 258

Query: 122 MSSLGFGCYAAVVAYQESSTKKGLLYVIASVSLFDEYTND 3
           +SS+  G + AVVAYQESS K GL YV++SVS+FDEYTND
Sbjct: 259 LSSIPLGAFGAVVAYQESSLKMGLSYVVSSVSIFDEYTND 298


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