BLASTX nr result

ID: Coptis21_contig00040619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040619
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518685.1| Interleukin-1 receptor-associated kinase, pu...    98   6e-19
ref|XP_002883890.1| hypothetical protein ARALYDRAFT_480399 [Arab...    96   3e-18
ref|XP_002300237.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|NP_179911.1| Leucine-rich repeat protein kinase family prote...    94   1e-17
ref|XP_002524923.1| LIM domain kinase, putative [Ricinus communi...    92   3e-17

>ref|XP_002518685.1| Interleukin-1 receptor-associated kinase, putative [Ricinus
           communis] gi|223542066|gb|EEF43610.1| Interleukin-1
           receptor-associated kinase, putative [Ricinus communis]
          Length = 736

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 4/83 (4%)
 Frame = -2

Query: 237 FLLPSLVPSLALNPDGVLLLYLKNSVLSDPFSMLQNWNHNDETPCSWNGVLCTPVRTEWS 58
           FL+  LVP+ ALN DG+LLL  K S LSDP S+L++WN++D+TPCSWNGV CT +  + +
Sbjct: 17  FLVLGLVPTFALNTDGILLLSFKYSTLSDPLSVLESWNYDDDTPCSWNGVTCTELGLQGT 76

Query: 57  ----RVISLVLPNSQLSGSIPSE 1
               RV SLVLP+SQL GSIP +
Sbjct: 77  PDMFRVTSLVLPSSQLLGSIPPD 99


>ref|XP_002883890.1| hypothetical protein ARALYDRAFT_480399 [Arabidopsis lyrata subsp.
           lyrata] gi|297329730|gb|EFH60149.1| hypothetical protein
           ARALYDRAFT_480399 [Arabidopsis lyrata subsp. lyrata]
          Length = 744

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
 Frame = -2

Query: 288 SIRSNNPNFCLRFCTIFFLLPSLVPSLALNPDGVLLLYLKNSVLSDPFSMLQNWNHNDET 109
           SIRSN     L F   F LLP+L+   ALN DGV LL  K S+L+DP S+L+NWN++DET
Sbjct: 3   SIRSN-----LFFHLFFLLLPTLIQ--ALNTDGVALLSFKYSILNDPLSVLRNWNYDDET 55

Query: 108 PCSWNGVLCTPVRT----EWSRVISLVLPNSQLSGSI 10
           PCSW GV CT + T    +  RV SLVLPN QL GS+
Sbjct: 56  PCSWTGVTCTELGTPNTPDMLRVTSLVLPNKQLLGSV 92


>ref|XP_002300237.1| predicted protein [Populus trichocarpa] gi|222847495|gb|EEE85042.1|
           predicted protein [Populus trichocarpa]
          Length = 757

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
 Frame = -2

Query: 240 FFLLPSLVPSLALNPDGVLLLYLKNSVLSDPFSMLQNWNHNDETPCSWNGVLCT----PV 73
           FFLL   +P+ ALN DGVLLL  K S+L DP S+L+ WN+ D+TPC W GV CT    P 
Sbjct: 14  FFLLGIALPTFALNTDGVLLLSFKYSILRDPLSVLETWNYEDKTPCFWKGVTCTELGLPG 73

Query: 72  RTEWSRVISLVLPNSQLSGSIPSE 1
             +  RV SLVLPNSQL GSIP +
Sbjct: 74  TPDMFRVTSLVLPNSQLLGSIPPD 97


>ref|NP_179911.1| Leucine-rich repeat protein kinase family protein [Arabidopsis
           thaliana] gi|2642433|gb|AAB87101.1| putative
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|224589517|gb|ACN59292.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|330252344|gb|AEC07438.1| Leucine-rich repeat protein
           kinase family protein [Arabidopsis thaliana]
          Length = 773

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
 Frame = -2

Query: 291 MSIRSNNPNFCLRFCTIFFLLPSL-VPSLALNPDGVLLLYLKNSVLSDPFSMLQNWNHND 115
           M  +S +P F + F   FF   SL + S ALN DGVLLL  K SVL DP S+LQ+WN++ 
Sbjct: 1   MKTQSASPFFFVSFFFFFFFFSSLFLLSSALNSDGVLLLSFKYSVLLDPLSLLQSWNYDH 60

Query: 114 ETPCSWNGVLCTPVRTEWSRVISLVLPNSQLSGSIPSE 1
           + PCSW GVLC       SRV++L LPNS L GSIPS+
Sbjct: 61  DNPCSWRGVLC----NNDSRVVTLSLPNSNLVGSIPSD 94


>ref|XP_002524923.1| LIM domain kinase, putative [Ricinus communis]
           gi|223535758|gb|EEF37420.1| LIM domain kinase, putative
           [Ricinus communis]
          Length = 785

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 3/81 (3%)
 Frame = -2

Query: 234 LLPSLVPSLALNPDGVLLLYLKNSVLSDPFSMLQNWNHNDETPCSWNGVLCTPV---RTE 64
           LL  +V S  LN DG+LLL LK S+LSDP  +L++W++NDETPCSWNGV C       T 
Sbjct: 21  LLLLVVQSFGLNTDGILLLSLKFSILSDPLRVLESWSYNDETPCSWNGVTCGGPGLDATS 80

Query: 63  WSRVISLVLPNSQLSGSIPSE 1
           +SRV  L LPNSQL GSIP++
Sbjct: 81  FSRVTGLSLPNSQLLGSIPAD 101


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