BLASTX nr result

ID: Coptis21_contig00040613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040613
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32068.3| unnamed protein product [Vitis vinifera]               40   6e-06
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...    40   6e-06

>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score = 39.7 bits (91), Expect(2) = 6e-06
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = -1

Query: 156 EIEEIIKYSCNEVCTTTQQLQKVMRI*TTVFRTNVG 49
           ++ ++IKYSC EVC TT+QL KVM+I TT     +G
Sbjct: 736 DLYQLIKYSCGEVC-TTEQLDKVMKIWTTFLEPMLG 770



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -2

Query: 68  FLEPMLGISPWQQGTEDSEDVV 3
           FLEPMLG+    QG EDSEDVV
Sbjct: 764 FLEPMLGVPSRPQGAEDSEDVV 785


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
           vinifera]
          Length = 1421

 Score = 39.7 bits (91), Expect(2) = 6e-06
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = -1

Query: 156 EIEEIIKYSCNEVCTTTQQLQKVMRI*TTVFRTNVG 49
           ++ ++IKYSC EVC TT+QL KVM+I TT     +G
Sbjct: 718 DLYQLIKYSCGEVC-TTEQLDKVMKIWTTFLEPMLG 752



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -2

Query: 68  FLEPMLGISPWQQGTEDSEDVV 3
           FLEPMLG+    QG EDSEDVV
Sbjct: 746 FLEPMLGVPSRPQGAEDSEDVV 767


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