BLASTX nr result

ID: Coptis21_contig00040577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040577
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266973.2| PREDICTED: U-box domain-containing protein 3...    59   5e-07
emb|CBI38656.3| unnamed protein product [Vitis vinifera]               59   5e-07
emb|CAN78862.1| hypothetical protein VITISV_021538 [Vitis vinifera]    59   5e-07
ref|NP_001056754.1| Os06g0140800 [Oryza sativa Japonica Group] g...    58   7e-07
ref|XP_002328828.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002266973.2| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 804

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = -2

Query: 165 EVLGRKDELVLALAPSLTVVVAVTRSKSSKYAVKWALDKFHLEGKVLFKLLHVSP 1
           E++  K EL LAL    T+ VA+   K SKY V+WAL+KF  EG  +FK+LHV P
Sbjct: 5   EIIEEKQELALALPLPSTIAVAINGKKKSKYVVRWALEKFVPEGLHMFKMLHVRP 59


>emb|CBI38656.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = -2

Query: 165 EVLGRKDELVLALAPSLTVVVAVTRSKSSKYAVKWALDKFHLEGKVLFKLLHVSP 1
           E++  K EL LAL    T+ VA+   K SKY V+WAL+KF  EG  +FK+LHV P
Sbjct: 5   EIIEEKQELALALPLPSTIAVAINGKKKSKYVVRWALEKFVPEGLHMFKMLHVRP 59


>emb|CAN78862.1| hypothetical protein VITISV_021538 [Vitis vinifera]
          Length = 804

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = -2

Query: 165 EVLGRKDELVLALAPSLTVVVAVTRSKSSKYAVKWALDKFHLEGKVLFKLLHVSP 1
           E++  K EL LAL    T+ VA+   K SKY V+WAL+KF  EG  +FK+LHV P
Sbjct: 5   EIIEEKQELALALPLPSTIAVAINGKKKSKYVVRWALEKFVPEGLHMFKMLHVRP 59


>ref|NP_001056754.1| Os06g0140800 [Oryza sativa Japonica Group]
           gi|113594794|dbj|BAF18668.1| Os06g0140800 [Oryza sativa
           Japonica Group] gi|215686770|dbj|BAG89620.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218197534|gb|EEC79961.1| hypothetical protein
           OsI_21572 [Oryza sativa Indica Group]
           gi|222634928|gb|EEE65060.1| hypothetical protein
           OsJ_20070 [Oryza sativa Japonica Group]
          Length = 806

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/50 (56%), Positives = 37/50 (74%)
 Frame = -2

Query: 150 KDELVLALAPSLTVVVAVTRSKSSKYAVKWALDKFHLEGKVLFKLLHVSP 1
           +DEL +      TV +AV  S++SK+A+KWALDKF  EGKVLF++LHV P
Sbjct: 11  EDELEMEAPSVSTVAIAVNGSRNSKHALKWALDKFVPEGKVLFQILHVRP 60


>ref|XP_002328828.1| predicted protein [Populus trichocarpa] gi|222839126|gb|EEE77477.1|
           predicted protein [Populus trichocarpa]
          Length = 67

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
 Frame = -2

Query: 150 KDELVLALAPS--LTVVVAVTRSKSSKYAVKWALDKFHLEGKVLFKLLHVSP 1
           ++E VL L PS  LTV +A+    SSKY V+WAL+KF  +GKV FKLLHV P
Sbjct: 8   EEEHVLGLPPSPPLTVGIAIDGKGSSKYLVQWALEKFMPQGKVAFKLLHVCP 59


Top