BLASTX nr result

ID: Coptis21_contig00040557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040557
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38888.1| unknown [Medicago truncatula]                          156   2e-36
ref|XP_002890140.1| hypothetical protein ARALYDRAFT_471797 [Arab...   155   2e-36
ref|XP_003604248.1| hypothetical protein MTR_4g007080 [Medicago ...   154   7e-36
ref|NP_563986.1| NDH-dependent cyclic electron flow 1 [Arabidops...   153   1e-35
ref|XP_002264393.2| PREDICTED: uncharacterized protein LOC100241...   148   4e-34

>gb|AFK38888.1| unknown [Medicago truncatula]
          Length = 460

 Score =  156 bits (394), Expect = 2e-36
 Identities = 78/96 (81%), Positives = 89/96 (92%)
 Frame = +1

Query: 1   VGEDASIVLITTPGQLAALINDSIGVIATNTAAIQLANARDKPSIALFSSEEKGRLFVPS 180
           VGED+SI+ ITTPGQLAALINDS GVIATNTAAIQLANAR+KPS+ALFSS+EKG  FVP 
Sbjct: 363 VGEDSSIIFITTPGQLAALINDSAGVIATNTAAIQLANAREKPSVALFSSKEKGNKFVPR 422

Query: 181 AEEKRCVIISSKTGKLVDIDIEAVTNAIQIFEGSLA 288
           AEEK+C++ISSKTGKL++ID+EAVTNAIQIF  SLA
Sbjct: 423 AEEKKCIVISSKTGKLINIDVEAVTNAIQIFNVSLA 458


>ref|XP_002890140.1| hypothetical protein ARALYDRAFT_471797 [Arabidopsis lyrata subsp.
           lyrata] gi|297335982|gb|EFH66399.1| hypothetical protein
           ARALYDRAFT_471797 [Arabidopsis lyrata subsp. lyrata]
          Length = 460

 Score =  155 bits (393), Expect = 2e-36
 Identities = 84/99 (84%), Positives = 88/99 (88%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1   VGEDASIVLITTPGQLAALINDSIGVIATNTAAIQLANARDKPSIALFSSEEKGRLFVPS 180
           VG+D SIV ITTPGQLAALINDS GVIATNTAAIQLANARDKPSI LFSSEEKG+LFVP 
Sbjct: 362 VGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPSIGLFSSEEKGKLFVPY 421

Query: 181 AEEK-RCVIISSKTGKLVDIDIEAVTNAIQIFEGSLALV 294
           AEEK  CVII+SKTGKL DIDI  V NA+QIFEGSLALV
Sbjct: 422 AEEKSNCVIIASKTGKLADIDIGTVKNAMQIFEGSLALV 460


>ref|XP_003604248.1| hypothetical protein MTR_4g007080 [Medicago truncatula]
           gi|355505303|gb|AES86445.1| hypothetical protein
           MTR_4g007080 [Medicago truncatula]
          Length = 472

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/96 (80%), Positives = 88/96 (91%)
 Frame = +1

Query: 1   VGEDASIVLITTPGQLAALINDSIGVIATNTAAIQLANARDKPSIALFSSEEKGRLFVPS 180
           VGED+SI+ ITTPGQLAALINDS GVIATNTAAIQLANAR+KPS+ALFSS+EKG  FVP 
Sbjct: 375 VGEDSSIIFITTPGQLAALINDSAGVIATNTAAIQLANAREKPSVALFSSKEKGNKFVPR 434

Query: 181 AEEKRCVIISSKTGKLVDIDIEAVTNAIQIFEGSLA 288
           AEEK+C++ISSKTGKL++ID+EAVTNAIQ F  SLA
Sbjct: 435 AEEKKCIVISSKTGKLINIDVEAVTNAIQTFNVSLA 470


>ref|NP_563986.1| NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]
           gi|6587804|gb|AAF18495.1|AC010924_8 ESTs gb|T43280,
           gb|AA395195 come from this gene [Arabidopsis thaliana]
           gi|16323198|gb|AAL15333.1| At1g15980/T24D18_8
           [Arabidopsis thaliana] gi|21537186|gb|AAM61527.1|
           unknown [Arabidopsis thaliana]
           gi|21700921|gb|AAM70584.1| At1g15980/T24D18_8
           [Arabidopsis thaliana] gi|332191271|gb|AEE29392.1|
           NDH-dependent cyclic electron flow 1 [Arabidopsis
           thaliana]
          Length = 461

 Score =  153 bits (387), Expect = 1e-35
 Identities = 82/99 (82%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1   VGEDASIVLITTPGQLAALINDSIGVIATNTAAIQLANARDKPSIALFSSEEKGRLFVPS 180
           VG+D SIV ITTPGQLAALINDS GVIATNTAAIQLANARDKP I LFSSEEKG+LFVP 
Sbjct: 363 VGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPCIGLFSSEEKGKLFVPY 422

Query: 181 AEEK-RCVIISSKTGKLVDIDIEAVTNAIQIFEGSLALV 294
           AEEK  CVII+SKTGKL DIDI  V NA+Q+FEGSLALV
Sbjct: 423 AEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEGSLALV 461


>ref|XP_002264393.2| PREDICTED: uncharacterized protein LOC100241596 [Vitis vinifera]
           gi|298204672|emb|CBI25170.3| unnamed protein product
           [Vitis vinifera]
          Length = 466

 Score =  148 bits (374), Expect = 4e-34
 Identities = 74/97 (76%), Positives = 88/97 (90%)
 Frame = +1

Query: 1   VGEDASIVLITTPGQLAALINDSIGVIATNTAAIQLANARDKPSIALFSSEEKGRLFVPS 180
           VGEDASIV ITTPGQLAALINDS+GVI TNTAA+QLA AR+KP IALFSS++KG LFVP+
Sbjct: 369 VGEDASIVFITTPGQLAALINDSLGVITTNTAAVQLATAREKPCIALFSSQQKGELFVPN 428

Query: 181 AEEKRCVIISSKTGKLVDIDIEAVTNAIQIFEGSLAL 291
           A+EK+C+I+SSKTGKLVDI++EAV  A +IF+ SLAL
Sbjct: 429 AQEKKCLIVSSKTGKLVDINVEAVKKATEIFDVSLAL 465


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