BLASTX nr result

ID: Coptis21_contig00040536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040536
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532508.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
ref|XP_002267969.1| PREDICTED: uncharacterized protein LOC100249...    58   7e-07
emb|CAN72908.1| hypothetical protein VITISV_018845 [Vitis vinifera]    58   7e-07

>ref|XP_002532508.1| conserved hypothetical protein [Ricinus communis]
           gi|223527783|gb|EEF29884.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 154

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
 Frame = -2

Query: 262 SNGVEDVVLCKNGQCSGRSRKLITV------PPFTSTTQKIVKNEGTKISPTAKRPTEEA 101
           + G+ +V++CK G C+G +RKL TV         TSTT K  +N GTK +P  K  +   
Sbjct: 51  TGGIGEVIICKEGHCTGMNRKLTTVITSATSTSTTSTTSKNKENGGTKANPMTKGISSNG 110

Query: 100 PIKNE-ENFSVKSLPHSEQRETTTGQYPDIID 8
            +  E E F++ S P+SE +E T   + DI+D
Sbjct: 111 EVGEEHEKFTINSSPNSEHQEVTHDSFVDIMD 142


>ref|XP_002267969.1| PREDICTED: uncharacterized protein LOC100249959 [Vitis vinifera]
           gi|296084561|emb|CBI25582.3| unnamed protein product
           [Vitis vinifera]
          Length = 150

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
 Frame = -2

Query: 262 SNG--VEDVVLCKNGQCS-GRSRKLITVPPFTSTTQKIVKNEGTKISPTAKRPTEEAPIK 92
           SNG  V +V LC++G CS G +RKL+T    TS+T     ++  K      +  ++ P +
Sbjct: 49  SNGGLVGEVTLCRDGHCSSGINRKLMTKTTSTSSTTPTTNSKNVK---NGGKSGDQVPGR 105

Query: 91  NEENFSVKSLPHSEQRETTTGQYPDIIDIA 2
            EENF V + P SE  E     YPDIIDIA
Sbjct: 106 EEENFYVNASPVSEHPEAAPEGYPDIIDIA 135


>emb|CAN72908.1| hypothetical protein VITISV_018845 [Vitis vinifera]
          Length = 151

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
 Frame = -2

Query: 262 SNG--VEDVVLCKNGQCS-GRSRKLITVPPFTSTTQKIVKNEGTKISPTAKRPTEEAPIK 92
           SNG  V +V LC++G CS G +RKL+T    TS+T     ++  K      +  ++ P +
Sbjct: 50  SNGGLVGEVTLCRDGHCSSGINRKLMTKTTSTSSTTPTTNSKNVK---NGGKSGDQVPGR 106

Query: 91  NEENFSVKSLPHSEQRETTTGQYPDIIDIA 2
            EENF V + P SE  E     YPDIIDIA
Sbjct: 107 EEENFYVNASPVSEHPEAAPEGYPDIIDIA 136


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