BLASTX nr result

ID: Coptis21_contig00040520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040520
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34692.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002532952.1| GTP binding protein, putative [Ricinus commu...   119   3e-25
ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis...   119   3e-25
ref|XP_002303577.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002304253.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>emb|CBI34692.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/90 (57%), Positives = 73/90 (81%)
 Frame = +1

Query: 13  SSSKETFTIWLKSLVFNGNGCTVYDANGKIIYRMDNYDRKQSSRVHLMDLKGNILFTILR 192
           +S +E FTIW+KSLV  GNGCTV++++G+I+YR+DNYD+K SS V+LMDL+G +LFTIL+
Sbjct: 23  TSKREAFTIWMKSLVIQGNGCTVFNSDGEIVYRIDNYDKKCSSEVYLMDLQGKVLFTILQ 82

Query: 193 KQKLSIFGCWEAYRYNGMEVEEGKPWFRVK 282
           + KL +FG WE Y+ NG +    KPWF+V+
Sbjct: 83  R-KLRVFGRWEGYKSNGSKGNNQKPWFQVR 111


>ref|XP_002532952.1| GTP binding protein, putative [Ricinus communis]
           gi|223527281|gb|EEF29436.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 203

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/90 (58%), Positives = 71/90 (78%)
 Frame = +1

Query: 13  SSSKETFTIWLKSLVFNGNGCTVYDANGKIIYRMDNYDRKQSSRVHLMDLKGNILFTILR 192
           +S +ETFTIW+KSLV NG GCTV+D+NG ++YR+DNY+ K+ + VHLMD KG +LFTILR
Sbjct: 20  TSKQETFTIWMKSLVLNGKGCTVFDSNGLVVYRVDNYNCKRRNEVHLMDFKGEVLFTILR 79

Query: 193 KQKLSIFGCWEAYRYNGMEVEEGKPWFRVK 282
           K KL ++GCWE YR    ++ E KP F+V+
Sbjct: 80  K-KLKLWGCWEGYRSIDAKINETKPVFQVR 108


>ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 204

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/90 (57%), Positives = 73/90 (81%)
 Frame = +1

Query: 13  SSSKETFTIWLKSLVFNGNGCTVYDANGKIIYRMDNYDRKQSSRVHLMDLKGNILFTILR 192
           +S +E FTIW+KSLV  GNGCTV++++G+I+YR+DNYD+K SS V+LMDL+G +LFTIL+
Sbjct: 23  TSKREAFTIWMKSLVIQGNGCTVFNSDGEIVYRIDNYDKKCSSEVYLMDLQGKVLFTILQ 82

Query: 193 KQKLSIFGCWEAYRYNGMEVEEGKPWFRVK 282
           + KL +FG WE Y+ NG +    KPWF+V+
Sbjct: 83  R-KLRVFGRWEGYKSNGSKGNNQKPWFQVR 111


>ref|XP_002303577.1| predicted protein [Populus trichocarpa] gi|222841009|gb|EEE78556.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/91 (60%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = +1

Query: 13  SSSKETFTIWLKSLVFNGNGCTVYDANGKIIYRMDNYDRKQSSRVHLMDLKGNILFTILR 192
           S  KETFTIW+KSLV   NGCTV+D+NG I+YR+DNYD+K SS+V+LMDL+G +L TI+R
Sbjct: 18  SLEKETFTIWMKSLVCQTNGCTVFDSNGDIVYRIDNYDKKCSSKVYLMDLRGRVLVTIIR 77

Query: 193 KQK-LSIFGCWEAYRYNGMEVEEGKPWFRVK 282
           +++ L I GCW  YR+N  +  E KPWF+VK
Sbjct: 78  RKRLLQIVGCWYGYRWN-PDANEEKPWFQVK 107


>ref|XP_002304253.1| predicted protein [Populus trichocarpa] gi|222841685|gb|EEE79232.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  117 bits (292), Expect = 1e-24
 Identities = 50/90 (55%), Positives = 71/90 (78%)
 Frame = +1

Query: 13  SSSKETFTIWLKSLVFNGNGCTVYDANGKIIYRMDNYDRKQSSRVHLMDLKGNILFTILR 192
           SS +E+FT+W+KSLV +G GCTV+D++G ++YR+DNYD K S+ VHLMD +G +L+TILR
Sbjct: 18  SSKQESFTVWMKSLVLSGKGCTVFDSDGHVVYRVDNYDSKSSNEVHLMDFEGKVLYTILR 77

Query: 193 KQKLSIFGCWEAYRYNGMEVEEGKPWFRVK 282
           K KL + G WE YR  G E+++ KP F+V+
Sbjct: 78  K-KLKLLGFWEGYRCEGSEIDKTKPGFQVR 106


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