BLASTX nr result

ID: Coptis21_contig00040515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040515
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271262.2| PREDICTED: probable LRR receptor-like serine...   138   4e-31
ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...   110   1e-22
ref|XP_002533985.1| serine-threonine protein kinase, plant-type,...   107   8e-22
ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine...   107   1e-21
ref|XP_002533428.1| serine-threonine protein kinase, plant-type,...   104   6e-21

>ref|XP_002271262.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1100

 Score =  138 bits (348), Expect = 4e-31
 Identities = 75/159 (47%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
 Frame = +3

Query: 3    EVPKQGVFLSTRNVSLIGNPNLCGGVPELQLPKCIVIKQNSDGPNLKXXXXXXXXXXXXX 182
            EVPK G+F +T  V L GNP LCGG+P L+LP C      S     +             
Sbjct: 697  EVPKGGIFSNTSAVFLSGNPGLCGGLPVLELPNCPATGSRSSSSRTRKMLIVGLTAGAAA 756

Query: 183  XXXXXX--MLVLLKRHKVN----SKVVSFGEPHKLYTYHDLRIATGNFDAGNIIGEGSFG 344
                    M +++KR K +    + V+SF  P +LY+Y+ L+ AT NF + N+IGEGSFG
Sbjct: 757  MCILIVLFMFLIMKRKKKHDPTVTDVISFEGPPRLYSYYVLKSATNNFSSENLIGEGSFG 816

Query: 345  RVYKGVLRDGTHVAVKVFNMEQHGALKSFFAECEALRHV 461
             VY+GV+RDGT  AVKVFNM+QHGA +SF AECEALR+V
Sbjct: 817  CVYRGVMRDGTLAAVKVFNMDQHGASRSFLAECEALRYV 855


>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score =  110 bits (275), Expect = 1e-22
 Identities = 65/159 (40%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
 Frame = +3

Query: 3    EVPKQGVFLSTRNVSLIGNPNLCGGVPELQLPKCIVI--KQNSDGPNLKXXXXXXXXXXX 176
            EVP  GVF +   +S+ GN  LCGG+P+LQLP C ++   ++  G +L            
Sbjct: 922  EVPSGGVFKNVSGISITGNNKLCGGIPQLQLPPCPIVASAKHGKGKHLSIKIIIAISIAG 981

Query: 177  XXXXXXXXMLVLLKRHK---VNSKVVSFGEPHKLYTYHDLRIATGNFDAGNIIGEGSFGR 347
                      VL  R K   + S   S G  +   +Y++L  AT  F + N+IG GSFG 
Sbjct: 982  VSCLAFIVASVLFYRRKKTTMKSSSTSLGYGYLRVSYNELLKATCGFASSNLIGMGSFGS 1041

Query: 348  VYKGVLRDGTH-VAVKVFNMEQHGALKSFFAECEALRHV 461
            VYKGVL  G   VAVKV N++QHGA KSF AEC+ LR +
Sbjct: 1042 VYKGVLSQGKRLVAVKVLNLQQHGASKSFMAECKVLRQI 1080


>ref|XP_002533985.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526036|gb|EEF28405.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 936

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/156 (41%), Positives = 82/156 (52%), Gaps = 4/156 (2%)
 Frame = +3

Query: 6   VPKQGVFLSTRNVSLIGNPNLCGGVPELQLPKCIVIKQNSDG--PNLKXXXXXXXXXXXX 179
           VP +GVF +    SL GN  LCGG+PE  L  CI  +    G   NL+            
Sbjct: 527 VPAKGVFRNVSATSLEGNNKLCGGIPEFHLAPCISTRHKKSGLTHNLRIVVATVCVLVGV 586

Query: 180 XXXXXXXMLVLLKRHKVNSKVVSFGEPHKL-YTYHDLRIATGNFDAGNIIGEGSFGRVYK 356
                  ++  LK+ +      SF E   L  +YH L  AT  F + N +G GSFG V+K
Sbjct: 587 TLLLWVIVVFFLKKKRRKESSSSFSEKKALELSYHTLYKATDGFSSANTLGAGSFGTVFK 646

Query: 357 GVLRDG-THVAVKVFNMEQHGALKSFFAECEALRHV 461
           G L  G T +AVKVFN+ +HGA KSF AECEALR++
Sbjct: 647 GELGGGETSIAVKVFNLMRHGAFKSFIAECEALRNI 682


>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like, partial [Vitis vinifera]
          Length = 965

 Score =  107 bits (267), Expect = 1e-21
 Identities = 62/155 (40%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
 Frame = +3

Query: 6    VPKQGVFLSTRNVSLIGNPNLCGGVPELQLPKCIVIKQNSDGPNLKXXXXXXXXXXXXXX 185
            +P +GVF +    S++GN  LCGG+PE QLPKC + +    G +L               
Sbjct: 536  LPTEGVFKNVSATSIMGNSKLCGGIPEFQLPKCNLQEPKKRGLSLALKIIIATVSGLLAI 595

Query: 186  XXXXXMLVLLKRHKVNSKVVSFGEPHKL--YTYHDLRIATGNFDAGNIIGEGSFGRVYKG 359
                  L+ L   K   +  S      L   +Y  L  AT  F + N+IG GSFG VYKG
Sbjct: 596  TCVLSFLIFLWLRKKKGEPASSSSEKSLLKVSYQSLLRATDGFSSSNLIGVGSFGSVYKG 655

Query: 360  VL-RDGTHVAVKVFNMEQHGALKSFFAECEALRHV 461
            +L  DGT +AVKV N+ + GA KSF AECEALR++
Sbjct: 656  ILDHDGTAIAVKVLNLLRKGASKSFIAECEALRNI 690


>ref|XP_002533428.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223526716|gb|EEF28948.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 963

 Score =  104 bits (260), Expect = 6e-21
 Identities = 66/156 (42%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
 Frame = +3

Query: 6    VPKQGVFLSTRNVSLIGNPNLCGGVPELQLPKCIVI--KQNSDGPNLKXXXXXXXXXXXX 179
            VP +G+F +    S+ GN  LCGG+PE QLP C     K+N   P LK            
Sbjct: 585  VPSKGIFKNASATSVEGNNMLCGGIPEFQLPVCNSARHKKNRLTPVLKTVISAISGMAFL 644

Query: 180  XXXXXXXMLVLLKRHKVNSKVVSFGEPHKL-YTYHDLRIATGNFDAGNIIGEGSFGRVYK 356
                    L   ++ KVN     F E   +  +Y +L  AT  F + NIIG GSFG VYK
Sbjct: 645  ILMLY---LFWFRQKKVNETTADFSEKKIMELSYQNLHKATDGFSSANIIGMGSFGSVYK 701

Query: 357  GVL-RDGTHVAVKVFNMEQHGALKSFFAECEALRHV 461
            G L R+GT +AVKVFN+ + G  KSF AECEALR++
Sbjct: 702  GRLDREGTLIAVKVFNLMRRGGFKSFLAECEALRNI 737


Top