BLASTX nr result

ID: Coptis21_contig00040507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040507
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147300.1| PREDICTED: uncharacterized protein LOC101222...    86   4e-15
ref|XP_002526341.1| zinc finger protein, putative [Ricinus commu...    84   9e-15
ref|XP_003538041.1| PREDICTED: uncharacterized protein LOC100790...    84   1e-14
ref|XP_004161320.1| PREDICTED: uncharacterized protein LOC101223...    83   2e-14
emb|CBI16265.3| unnamed protein product [Vitis vinifera]               81   8e-14

>ref|XP_004147300.1| PREDICTED: uncharacterized protein LOC101222498 [Cucumis sativus]
          Length = 546

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
 Frame = -2

Query: 367 DSLLEPQ-TGEFDPQTTELL---LMFEQELKDREIWETETRKVRDDLKLRLHDRKFAQEL 200
           D +L+ + T   D  TT +L     F  E KDRE  +TE RK++++L  R+HD+KFA+ +
Sbjct: 64  DPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFAEFI 123

Query: 199 LQIPEKQWQNDGAYVQKPFGDGSSSSTSQEVAAIDDGEPFQLYFKGLFSREKVGEGGQIV 20
             +PE +W+  G   +KP+G+ SSSS+S   +   D E  ++Y KGL S E++ +   +V
Sbjct: 124 RSVPENEWREYGDNYEKPYGESSSSSSSSSSSWSVDSECCRVYSKGLISEERIRD--MVV 181

Query: 19  YVAAIG 2
            VA IG
Sbjct: 182 RVAGIG 187


>ref|XP_002526341.1| zinc finger protein, putative [Ricinus communis]
           gi|223534300|gb|EEF36012.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 571

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/94 (44%), Positives = 62/94 (65%)
 Frame = -2

Query: 322 TELLLMFEQELKDREIWETETRKVRDDLKLRLHDRKFAQELLQIPEKQWQNDGAYVQKPF 143
           +E +   EQE+ DR+  E ET+K+++DL  R+HD+K A+E+L+IPE +W+  G   +KP+
Sbjct: 85  SEEITKLEQEINDRKQSEFETQKIKEDLHRRVHDQKLAREILRIPEPEWREWGDNFEKPY 144

Query: 142 GDGSSSSTSQEVAAIDDGEPFQLYFKGLFSREKV 41
           G+GSSSS +       D   F+LYFKGL   E V
Sbjct: 145 GEGSSSSGASRSVQNSD-SVFRLYFKGLICEENV 177


>ref|XP_003538041.1| PREDICTED: uncharacterized protein LOC100790037 [Glycine max]
          Length = 557

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
 Frame = -2

Query: 319 ELLLMFEQELKDREIWETETRKVRDDLKLRLHDRKFAQELLQIPEKQWQNDGAYVQKPFG 140
           E L   E+E+KDRE  E ET K+R++L  R+HD K A+E+  IPEK WQ  G   +KPFG
Sbjct: 79  EELARMEREMKDREQSEAETLKMREELCRRIHDEKVAREISAIPEKDWQQWGDNFEKPFG 138

Query: 139 DGSSSST-SQEVAAIDDGEPFQLYFKGLFSREKVGEGGQIVYVAAIG 2
           +GSSSS+ S+E   +      ++YFKGL S E V   G+ V ++ IG
Sbjct: 139 EGSSSSSLSREEGVV------RVYFKGLVSEENV--RGRKVVLSGIG 177


>ref|XP_004161320.1| PREDICTED: uncharacterized protein LOC101223490 [Cucumis sativus]
          Length = 547

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/127 (38%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
 Frame = -2

Query: 367 DSLLEPQ-TGEFDPQTTELL---LMFEQELKDREIWETETRKVRDDLKLRLHDRKFAQEL 200
           D +L+ + T   D  TT +L     F  E KDRE  +TE RK++++L  R+HD+KFA+ +
Sbjct: 64  DPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFAEFI 123

Query: 199 LQIPEKQWQNDGAYVQKPFGDGSSSSTSQEVAAID-DGEPFQLYFKGLFSREKVGEGGQI 23
             +PE +W+  G   +KP+G+ SSSS+S   ++   D E  ++Y KGL S E++ +   +
Sbjct: 124 RSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRD--MV 181

Query: 22  VYVAAIG 2
           V VA IG
Sbjct: 182 VRVAGIG 188


>emb|CBI16265.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/114 (38%), Positives = 64/114 (56%)
 Frame = -2

Query: 379 DAMTDSLLEPQTGEFDPQTTELLLMFEQELKDREIWETETRKVRDDLKLRLHDRKFAQEL 200
           D     L   QT E D          EQE++DR+  E E  K+R+D+  R HD+K A+E+
Sbjct: 67  DCFVSGLRALQTDELD--------RLEQEVRDRQQSEAEMTKLREDIHRRAHDQKLAREI 118

Query: 199 LQIPEKQWQNDGAYVQKPFGDGSSSSTSQEVAAIDDGEPFQLYFKGLFSREKVG 38
            Q+PE++W+  G   ++PFG+GSSS           GE F+++FKGL   EK+G
Sbjct: 119 SQMPEEEWEEYGDNYERPFGEGSSS-----------GEVFRVFFKGLAREEKIG 161


Top