BLASTX nr result

ID: Coptis21_contig00040454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040454
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272106.1| PREDICTED: uncharacterized protein LOC100249...    65   4e-09
emb|CAN80626.1| hypothetical protein VITISV_032618 [Vitis vinifera]    65   4e-09
ref|XP_004134908.1| PREDICTED: uncharacterized protein LOC101213...    62   6e-08
ref|XP_002532979.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002272106.1| PREDICTED: uncharacterized protein LOC100249766 [Vitis vinifera]
           gi|297740762|emb|CBI30944.3| unnamed protein product
           [Vitis vinifera]
          Length = 486

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 19/92 (20%)
 Frame = -3

Query: 253 KMRLGS-NLPRRKSTEETRT------------TLRPEDFNDVFGGPPKTILSRKKSVPDF 113
           +MR+G  NLPRRKSTEET +            T+ PEDF+DVFGGPP+++LSR+ S  DF
Sbjct: 6   RMRMGMHNLPRRKSTEETSSQRSRKTFSGESRTMHPEDFSDVFGGPPRSVLSRQYS-GDF 64

Query: 112 SFS------YQDVYQSPEYDFSSKNGRNVPVF 35
           +        Y+++++  +    +++GR +PVF
Sbjct: 65  TARAQSNSFYEEIFRPADLGAPARSGRVLPVF 96


>emb|CAN80626.1| hypothetical protein VITISV_032618 [Vitis vinifera]
          Length = 492

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 19/92 (20%)
 Frame = -3

Query: 253 KMRLGS-NLPRRKSTEETRT------------TLRPEDFNDVFGGPPKTILSRKKSVPDF 113
           +MR+G  NLPRRKSTEET +            T+ PEDF+DVFGGPP+++LSR+ S  DF
Sbjct: 6   RMRMGMHNLPRRKSTEETSSQRSRKTFSGESRTMHPEDFSDVFGGPPRSVLSRQYS-GDF 64

Query: 112 SFS------YQDVYQSPEYDFSSKNGRNVPVF 35
           +        Y+++++  +    +++GR +PVF
Sbjct: 65  TARAQSNSFYEEIFRPADLGAPARSGRVLPVF 96


>ref|XP_004134908.1| PREDICTED: uncharacterized protein LOC101213807 [Cucumis sativus]
           gi|449490704|ref|XP_004158682.1| PREDICTED:
           uncharacterized protein LOC101230929 [Cucumis sativus]
          Length = 475

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 14/87 (16%)
 Frame = -3

Query: 253 KMRLGS-NLPRRKSTE--------ETRTTLRPEDFNDVFGGPPKTILSRKKS----VPDF 113
           +MR+G   LPRR+S E        +    L  EDF+DVFGGPP+++LSR+ S       F
Sbjct: 6   RMRIGMPELPRRRSAEGPSIRSFSKGAQPLSQEDFSDVFGGPPQSVLSRQFSGELGHKQF 65

Query: 112 SFSYQDVYQSPEYDFSSKN-GRNVPVF 35
            F Y+++++ PE+  S+KN GR++PVF
Sbjct: 66  DFFYEEMFRPPEFFSSAKNAGRSLPVF 92


>ref|XP_002532979.1| conserved hypothetical protein [Ricinus communis]
           gi|223527243|gb|EEF29403.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 482

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 22/95 (23%)
 Frame = -3

Query: 253 KMRLGSNLPRRKSTEETRT--------TLRPEDFNDVFGGPPKTILSRKKSVPDFSFS-- 104
           +MR+G  +PRR+S E+T +         L P+DF+DVFGGPP+++LSRK S  DF+ +  
Sbjct: 6   RMRMG--IPRRRSMEDTTSGSTHRSIEALDPDDFSDVFGGPPRSVLSRKFS-GDFTSTRS 62

Query: 103 -----YQDVYQSPEY-------DFSSKNGRNVPVF 35
                Y++V++ PE+         S   GR++P F
Sbjct: 63  SSTSFYEEVFRPPEFVSTVLDKKKSGAGGRSLPAF 97


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