BLASTX nr result

ID: Coptis21_contig00040143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040143
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]    72   6e-11
emb|CBI20163.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...    69   3e-10
ref|XP_002283439.2| PREDICTED: probable disease resistance prote...    67   2e-09
ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...    63   3e-08

>emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]
          Length = 1052

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
 Frame = +1

Query: 10   FLSTRVLQHLQNLEEIHVLDCGQMEELIV--------EEESDKGSNDTNN--ITXXXXXX 159
            F    V  HL+NL+ IHV +C QME+LIV        EEE ++  N+ NN  +       
Sbjct: 772  FTPELVKYHLKNLQTIHVSNCRQMEDLIVAVEEEEEEEEEEEEDINEMNNLILCFPNLQS 831

Query: 160  XXXXXXXXXXXIWNGVMICDSLQTVCVEKCAELKRFP------QISGEDQSPPTSLERIQ 321
                       IW G M CDSLQ + V  C +L+R P         GE ++    L++I+
Sbjct: 832  LMLEGLPKLKIIWKGTMTCDSLQQLTVLDCPKLRRVPLSVHINDCDGERRASTPPLKQIR 891

Query: 322  GSGEWWD 342
            G  EWW+
Sbjct: 892  GEKEWWE 898


>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
 Frame = +1

Query: 25   VLQHLQNLEEIHVLDCGQMEELIVEEESDKGSNDTNN--ITXXXXXXXXXXXXXXXXXIW 198
            V  HLQNL+ I+V  C QME++IV  E ++  N+ NN  +                  IW
Sbjct: 786  VKNHLQNLQNIYVRSCSQMEDIIVGVE-EEDINEKNNPILCFPNFRCLELVDLPKLKGIW 844

Query: 199  NGVMICDSLQTVCVEKCAELKRFP--------QISGEDQSPPTSLERIQGSGEWWDSL 348
             G M CDSLQ + V KC  LKR P          +G+ ++    L++I G  EWWD +
Sbjct: 845  KGTMTCDSLQHLLVLKCRNLKRLPFAVSVHINDGNGQRRASTPPLKQIGGDKEWWDGV 902


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1016

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
 Frame = +1

Query: 25   VLQHLQNLEEIHVLDCGQMEELIVEEESDKGSNDTNN--ITXXXXXXXXXXXXXXXXXIW 198
            V  HLQNL+ I+V  C QME++IV  E ++  N+ NN  +                  IW
Sbjct: 855  VKNHLQNLQNIYVRSCSQMEDIIVGVE-EEDINEKNNPILCFPNFRCLELVDLPKLKGIW 913

Query: 199  NGVMICDSLQTVCVEKCAELKRFP--------QISGEDQSPPTSLERIQGSGEWWDSL 348
             G M CDSLQ + V KC  LKR P          +G+ ++    L++I G  EWWD +
Sbjct: 914  KGTMTCDSLQHLLVLKCRNLKRLPFAVSVHINDGNGQRRASTPPLKQIGGDKEWWDGV 971


>ref|XP_002283439.2| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1276

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
 Frame = +1

Query: 10   FLSTRVLQHLQNLEEIHVLDCGQMEELIV-------EEESDKGSNDTNNIT--XXXXXXX 162
            F    V  HL+NL+ I V +C QME+LIV       EEE ++  N  +N+          
Sbjct: 1106 FTPELVKYHLKNLQSIDVGNCRQMEDLIVAAEVEEEEEEEEEVINQRHNLILYFPNLQSL 1165

Query: 163  XXXXXXXXXXIWNGVMICDSLQTVCVEKCAELKRFP---QI---SGEDQSPPTSLERIQG 324
                      IW G M CDSLQ + V  C EL+R P   QI   SGE ++    L++I+G
Sbjct: 1166 TLENLPKLKSIWKGTMTCDSLQ-LTVWNCPELRRLPLSVQINDGSGERRASTPPLKQIRG 1224

Query: 325  SGEWWDSL 348
              EWWD L
Sbjct: 1225 EKEWWDGL 1232


>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 958

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
 Frame = +1

Query: 1    LKTFLSTRVLQHLQNLEEIHVLDCGQMEELIVEEESDKG--------SNDTNNIT-XXXX 153
            +K   S  +L +L+NLE I V DC +MEE+I  EE ++G        S++ N +T     
Sbjct: 810  MKNLFSLDLLPNLKNLEVIEVDDCHKMEEIIAIEEEEEGTMVKDSNRSSNRNTVTNLSKL 869

Query: 154  XXXXXXXXXXXXXIWNGVMICDSLQTVCVEKCAELKRFP---QISGEDQSPPTSLERIQG 324
                         I+ GV+IC SLQ + V  C ELKR P    + G  Q P   L RIQ 
Sbjct: 870  RALKLSNLPELKSIFQGVVICGSLQEILVVNCPELKRIPLFDPVLGIGQIP---LRRIQA 926

Query: 325  -SGEWWD 342
               EWW+
Sbjct: 927  YPKEWWE 933


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