BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039984
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP76348.1| small subunit ribosomal protein [Bocconia frutesc...   196   2e-48
gb|AAP76345.1| small subunit ribosomal protein [Akebia quinata]       194   5e-48
gb|AAP76346.1| small subunit ribosomal protein [Stylophorum diph...   194   5e-48
gb|AAP76362.1| small subunit ribosomal protein [Trochodendron ar...   194   8e-48
gb|AAP76351.1| small subunit ribosomal protein, partial (mitocho...   194   8e-48

>gb|AAP76348.1| small subunit ribosomal protein [Bocconia frutescens]
           gi|32348780|gb|AAP76363.1| small subunit ribosomal
           protein [Tetracentron sinense]
          Length = 148

 Score =  196 bits (498), Expect = 2e-48
 Identities = 97/98 (98%), Positives = 97/98 (98%)
 Frame = +1

Query: 1   SEEDEQLERKNKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAAEA 180
           SEEDEQLERKNKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEE KGGSRLSRYAAEA
Sbjct: 31  SEEDEQLERKNKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSRYAAEA 90

Query: 181 TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR 294
           TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR
Sbjct: 91  TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR 128


>gb|AAP76345.1| small subunit ribosomal protein [Akebia quinata]
          Length = 148

 Score =  194 bits (494), Expect = 5e-48
 Identities = 96/98 (97%), Positives = 97/98 (98%)
 Frame = +1

Query: 1   SEEDEQLERKNKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAAEA 180
           SEEDEQLERK KDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAA+A
Sbjct: 31  SEEDEQLERKKKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAAKA 90

Query: 181 TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR 294
           TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR
Sbjct: 91  TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR 128


>gb|AAP76346.1| small subunit ribosomal protein [Stylophorum diphyllum]
          Length = 132

 Score =  194 bits (494), Expect = 5e-48
 Identities = 96/98 (97%), Positives = 97/98 (98%)
 Frame = +1

Query: 1   SEEDEQLERKNKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAAEA 180
           S+EDEQLERKNKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEE KGGSRLSRYAAEA
Sbjct: 15  SKEDEQLERKNKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSRYAAEA 74

Query: 181 TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR 294
           TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR
Sbjct: 75  TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR 112


>gb|AAP76362.1| small subunit ribosomal protein [Trochodendron aralioides]
          Length = 148

 Score =  194 bits (492), Expect = 8e-48
 Identities = 96/98 (97%), Positives = 96/98 (97%)
 Frame = +1

Query: 1   SEEDEQLERKNKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAAEA 180
           SEEDEQLERKN DFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEE KGGSRLSRYAAEA
Sbjct: 31  SEEDEQLERKNTDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSRYAAEA 90

Query: 181 TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR 294
           TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR
Sbjct: 91  TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR 128


>gb|AAP76351.1| small subunit ribosomal protein, partial (mitochondrion) [Cocculus
           carolinus]
          Length = 148

 Score =  194 bits (492), Expect = 8e-48
 Identities = 95/98 (96%), Positives = 97/98 (98%)
 Frame = +1

Query: 1   SEEDEQLERKNKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAAEA 180
           SEEDEQLERKNKDFVHLPPIHNNTFVTVTDARGN+KTGASAGCLEEFKGGSRLSRYAAEA
Sbjct: 31  SEEDEQLERKNKDFVHLPPIHNNTFVTVTDARGNQKTGASAGCLEEFKGGSRLSRYAAEA 90

Query: 181 TAEHVGRSARNLGMKSVVMKVKGSTYFRKKKAVILSWR 294
           TAEHVGRSAR +GMKSVVMKVKGSTYFRKKKAVILSWR
Sbjct: 91  TAEHVGRSARKMGMKSVVMKVKGSTYFRKKKAVILSWR 128