BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039980
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880604.1| transcriptional factor B3 family protein [Ar...    77   2e-12
ref|NP_567162.2| putative B3 domain-containing protein REM15 [Ar...    74   1e-11
dbj|BAC42177.1| unknown protein [Arabidopsis thaliana]                 72   4e-11
ref|NP_001189594.1| Transcriptional factor B3 family protein [Ar...    72   4e-11
gb|AAD23895.1| hypothetical protein [Arabidopsis thaliana]             72   4e-11

>ref|XP_002880604.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297326443|gb|EFH56863.1| transcriptional
            factor B3 family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1609

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
 Frame = +3

Query: 51   FAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGMCYIR 230
            F   + P +     M++P  F R+NG+   +  + L +  G++WK+ LR KPS G  Y++
Sbjct: 1251 FVAKVAPSSLSYDSMHLPRPFVRENGVVTGSGEIVLMNEKGRSWKLKLRQKPSCGTVYVK 1310

Query: 231  NDWLHFADSNKLKLGDGCTFKLLSRGXXXXXXXXXXXXXXXGLTASRHPYITIP-MHPYH 407
              W+ F D+N L+ GD  TFKL+ RG                 ++S  P   +  + P  
Sbjct: 1311 GGWVSFCDANGLRAGDIYTFKLIQRGGTLVLRLLPNEEAE---SSSLDPSCFVANVAPSS 1367

Query: 408  KSYH-LVIPRAFGRENGLTNKC 470
              Y  L +PR F RENGL  +C
Sbjct: 1368 LRYDTLYLPRRFMRENGLDKRC 1389



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 47/89 (52%)
 Frame = +3

Query: 42   PPHFAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGMC 221
            P  F   + P + +   +Y+P +F R+NGL  R   M L +  GK+W + L+ K S G  
Sbjct: 1356 PSCFVANVAPSSLRYDTLYLPRRFMRENGLDKRCGKMILMNEKGKSWTLDLKQKKSCGTS 1415

Query: 222  YIRNDWLHFADSNKLKLGDGCTFKLLSRG 308
             I+  W  F  +N L+ G   TFKL+ +G
Sbjct: 1416 LIKRGWSSFCRANGLRAGSIITFKLIKKG 1444


>ref|NP_567162.2| putative B3 domain-containing protein REM15 [Arabidopsis thaliana]
           gi|238065256|sp|O23076.2|REM15_ARATH RecName:
           Full=Putative B3 domain-containing protein REM15;
           AltName: Full=Protein REPRODUCTIVE MERISTEM 15
           gi|332656447|gb|AEE81847.1| putative B3
           domain-containing protein REM15 [Arabidopsis thaliana]
          Length = 528

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/88 (38%), Positives = 49/88 (55%)
 Frame = +3

Query: 42  PPHFAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGMC 221
           P  F   + P + +  +M  P  F RDNG+    E++ + +  G++W   LR KPS G  
Sbjct: 133 PSCFVANVAPSSLRYDLMRFPRGFVRDNGVVGSGEIVLMNEK-GRSWNFNLRQKPSNGTV 191

Query: 222 YIRNDWLHFADSNKLKLGDGCTFKLLSR 305
           Y+R  W+ F D+N LK GD  TFKL+ R
Sbjct: 192 YVRGGWVSFCDANGLKAGDNYTFKLIKR 219



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +3

Query: 12  VTRMARKVKAPPH-FAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKV 188
           VTR A      P  F   + P + +   +Y+P +F R+NG+  R   M L +  GK+W +
Sbjct: 266 VTREAESSSQDPSCFVANVSPSSLRYDTLYLPKRFMRENGVDKRCGEMILINEKGKSWTL 325

Query: 189 YLRYKPSQGMCYIRNDWLHFADSNKLKLGDGCTFKLLSR 305
            L+ K S G   I+  W  F  +N L+ G   T KL+ +
Sbjct: 326 DLKVKKSSGTSLIKRGWRSFCSANGLRAGSIITLKLIKK 364


>dbj|BAC42177.1| unknown protein [Arabidopsis thaliana]
          Length = 490

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/142 (29%), Positives = 67/142 (47%)
 Frame = +3

Query: 42  PPHFAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGMC 221
           P  F+  + P + +  +M  P  F R+NG+    +++ + +  G++W   LR KPS G  
Sbjct: 128 PSCFSANVAPSSLRYDLMLFPMGFVRENGVVGSGKIVLMNEK-GRSWNFNLRQKPSCGTV 186

Query: 222 YIRNDWLHFADSNKLKLGDGCTFKLLSRGXXXXXXXXXXXXXXXGLTASRHPYITIPMHP 401
           Y+R  W+ F D+N L+ GD  TFKL+ RG                L  S       P   
Sbjct: 187 YVRGGWVSFCDANGLQAGDIYTFKLIKRGGTLVLRLLPKGAESCSLDPSCFVANVAPSTL 246

Query: 402 YHKSYHLVIPRAFGRENGLTNK 467
            + +  L +P+ F RENG+  +
Sbjct: 247 RYDT--LYLPKRFMRENGVDKR 266



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/88 (34%), Positives = 45/88 (51%)
 Frame = +3

Query: 42  PPHFAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGMC 221
           P  F   + P   +   +Y+P +F R+NG+  R   M L +  GK+W + L+ K S G  
Sbjct: 234 PSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGTS 293

Query: 222 YIRNDWLHFADSNKLKLGDGCTFKLLSR 305
            IR  W  F  +N L+ G   TFKL+ +
Sbjct: 294 LIRRGWRSFCSANGLRAGSIITFKLIKK 321


>ref|NP_001189594.1| Transcriptional factor B3 family protein [Arabidopsis thaliana]
           gi|322510067|sp|Q8GYM4.2|REM14_ARATH RecName: Full=B3
           domain-containing protein REM14; AltName: Full=Protein
           REPRODUCTIVE MERISTEM 14 gi|330252515|gb|AEC07609.1|
           Transcriptional factor B3 family protein [Arabidopsis
           thaliana]
          Length = 490

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/142 (29%), Positives = 67/142 (47%)
 Frame = +3

Query: 42  PPHFAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGMC 221
           P  F+  + P + +  +M  P  F R+NG+    +++ + +  G++W   LR KPS G  
Sbjct: 128 PSCFSANVAPSSLRYDLMLFPMGFVRENGVVGSGKIVLMNEK-GRSWNFNLRQKPSCGTV 186

Query: 222 YIRNDWLHFADSNKLKLGDGCTFKLLSRGXXXXXXXXXXXXXXXGLTASRHPYITIPMHP 401
           Y+R  W+ F D+N L+ GD  TFKL+ RG                L  S       P   
Sbjct: 187 YVRGGWVSFCDANGLQAGDIYTFKLIKRGGTLVLRLLPKGAESCSLDPSCFVANVAPSTL 246

Query: 402 YHKSYHLVIPRAFGRENGLTNK 467
            + +  L +P+ F RENG+  +
Sbjct: 247 RYDT--LYLPKRFMRENGVDKR 266



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/88 (34%), Positives = 45/88 (51%)
 Frame = +3

Query: 42  PPHFAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGMC 221
           P  F   + P   +   +Y+P +F R+NG+  R   M L +  GK+W + L+ K S G  
Sbjct: 234 PSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGTS 293

Query: 222 YIRNDWLHFADSNKLKLGDGCTFKLLSR 305
            IR  W  F  +N L+ G   TFKL+ +
Sbjct: 294 LIRRGWRSFCSANGLRAGSIITFKLIKK 321


>gb|AAD23895.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1440

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/142 (29%), Positives = 67/142 (47%)
 Frame = +3

Query: 42   PPHFAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGMC 221
            P  F+  + P + +  +M  P  F R+NG+    +++ + +  G++W   LR KPS G  
Sbjct: 1078 PSCFSANVAPSSLRYDLMLFPMGFVRENGVVGSGKIVLMNEK-GRSWNFNLRQKPSCGTV 1136

Query: 222  YIRNDWLHFADSNKLKLGDGCTFKLLSRGXXXXXXXXXXXXXXXGLTASRHPYITIPMHP 401
            Y+R  W+ F D+N L+ GD  TFKL+ RG                L  S       P   
Sbjct: 1137 YVRGGWVSFCDANGLQAGDIYTFKLIKRGGTLVLRLLPKGAESCSLDPSCFVANVAPSTL 1196

Query: 402  YHKSYHLVIPRAFGRENGLTNK 467
             + +  L +P+ F RENG+  +
Sbjct: 1197 RYDT--LYLPKRFMRENGVDKR 1216



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/88 (34%), Positives = 45/88 (51%)
 Frame = +3

Query: 42   PPHFAVTLQPYNFKGSIMYIPSKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGMC 221
            P  F   + P   +   +Y+P +F R+NG+  R   M L +  GK+W + L+ K S G  
Sbjct: 1184 PSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGTS 1243

Query: 222  YIRNDWLHFADSNKLKLGDGCTFKLLSR 305
             IR  W  F  +N L+ G   TFKL+ +
Sbjct: 1244 LIRRGWRSFCSANGLRAGSIITFKLIKK 1271