BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039979
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    96   4e-18
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    93   2e-17
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    83   3e-14
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
dbj|BAK06434.1| predicted protein [Hordeum vulgare subsp. vulgare]     78   8e-13

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = +2

Query: 98  VYFTTVFEIFKLDLVASQWVEVKSLCGRSLFLGENSPICLSSSEFPGCKPNSIYFTDDYF 277
           +Y TT F++ +LDL A +W  V SL  R+LFLGEN  + LSS +FPGCK N IY+TDDY 
Sbjct: 284 IYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYS 343

Query: 278 E-AYAFLEHELHPNEPYDVGIFTLEDGSVERHFPLEYKLKSAPPIWIEP 421
           E  Y  +  E       D+GIF LEDGS+E      ++++  PP+W+ P
Sbjct: 344 EDNYDGIGGE------QDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
 Frame = +2

Query: 98  VYFTTVFEIFKLDLVASQWVEVKSLCGRSLFLGENSPICLSSSEFPGCKPNSIYFTDDYF 277
           +Y TT F++ +LD  A +W  V SL  R+LFLGEN  + LSS +FPGCK N IY+TDDY 
Sbjct: 284 IYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYS 343

Query: 278 E-AYAFLEHELHPNEPYDVGIFTLEDGSVERHFPLEYKLKSAPPIWIEP 421
           E  Y  +  E       D+GIF LEDGS+E      ++++  PP+W+ P
Sbjct: 344 EDNYDGIGGE------QDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 8/116 (6%)
 Frame = +2

Query: 98  VYFTTVFEIFKLDLVASQWVEVKSLCGRSLFLGENSPICLSSSEFPGCKPNSIYFTDDYF 277
           +Y T  FE+F+LD    QW+ + +L  ++LF+GENS + LS+++F GC  N IY+TDDY 
Sbjct: 289 IYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYL 348

Query: 278 EAYAFLEHELHPNEPYDVGIFTLEDGSVE------RHF--PLEYKLKSAPPIWIEP 421
           +A     ++ H  + +D+GIF L D ++E      R+F  PL++    +PP+W+ P
Sbjct: 349 DA----NYDGHFGD-HDLGIFKLCDETIEPLPCYPRNFTSPLQW----SPPLWVSP 395


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
 Frame = +2

Query: 98  VYFTTVFEIFKLDLVASQWVEVKSLCGRSLFLGENSPICLSSSEFPGCKPNSIYFTDDYF 277
           +Y T  FE+FKLDL   +W  V SL    LF+GENS + LS+S   GC  + IY+TDD  
Sbjct: 284 IYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDD-- 341

Query: 278 EAYAFLEHELHPNEPYDVGIFTLEDGSVERHFPLE-------YKLKSAPPIWIEP 421
             Y+   ++ H  E +D+GIF L DGS+E   PL         +L+  PP+WI P
Sbjct: 342 --YSANNYDGHIGE-HDLGIFKLSDGSIE---PLPCYPRNSYSRLQWPPPLWISP 390


>dbj|BAK06434.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 465

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
 Frame = +2

Query: 83  GYSESVYFTTVFEIFKLDLVASQWVEVKSLCGRSLFLGENSPICLSSSEFPGCKPNSIYF 262
           GY E +  T    + K+D+ A   VE+ SL    LFLG N PICLS+ E+P  K N +YF
Sbjct: 349 GYEELIVETNKILLHKVDMEAEDLVEINSLHHNVLFLGRNQPICLSAEEYPQLKANCVYF 408

Query: 263 TDDYFEAYAFLEHELHPNEPYDVGIFTLEDGSVERHF-PLEYKLKSAPPIWIEPTL 427
            DD  E Y +    ++   P D+G+  LED S E    PL     S  PIWI P+L
Sbjct: 409 ADD--EQYNW----MYKTNPRDIGVLNLEDDSREEIVSPLWCSWPS--PIWITPSL 456