BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039974
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   140   1e-31
ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
tpg|DAA55260.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea m...   131   6e-29
tpg|DAA55259.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea m...   131   6e-29
gb|ACN27400.1| unknown [Zea mays]                                     131   6e-29

>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 321

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/79 (82%), Positives = 73/79 (92%)
 Frame = +1

Query: 1   KLVKAFTDHKIRKTYIALCIGLVPKWEKISIKSGHGRSKFGVWRVYAASDVGRSLPGGSN 180
           KLVKAFTDHKI+KTYIALCIGL PKWEKI+IKSGHGRSKFGVWRVYAASDVG++LPGGS 
Sbjct: 133 KLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGST 192

Query: 181 VRDMATMFEVLAVNKKGKF 237
           V+DM T FE+L+VN +G F
Sbjct: 193 VKDMETSFELLSVNGQGSF 211


>ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|222857331|gb|EEE94878.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/79 (81%), Positives = 71/79 (89%)
 Frame = +1

Query: 1   KLVKAFTDHKIRKTYIALCIGLVPKWEKISIKSGHGRSKFGVWRVYAASDVGRSLPGGSN 180
           KLVKAFTDHK+RKTYIALCIG  PKWEKI+IKSGHGRSKFG +RVYAASDVGRSLPGGS 
Sbjct: 70  KLVKAFTDHKVRKTYIALCIGSAPKWEKITIKSGHGRSKFGAFRVYAASDVGRSLPGGST 129

Query: 181 VRDMATMFEVLAVNKKGKF 237
           V+DM T FEVL++N +G F
Sbjct: 130 VKDMETSFEVLSINGQGSF 148


>tpg|DAA55260.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea mays]
          Length = 348

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/79 (78%), Positives = 67/79 (84%)
 Frame = +1

Query: 1   KLVKAFTDHKIRKTYIALCIGLVPKWEKISIKSGHGRSKFGVWRVYAASDVGRSLPGGSN 180
           KLVKAFTDHK++KTY+ALCIG  P WEKI I SGHGRSK G WRVYA SDVGRSLPGGS 
Sbjct: 155 KLVKAFTDHKVKKTYLALCIGFPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSV 214

Query: 181 VRDMATMFEVLAVNKKGKF 237
           VRDM+T FEVL VN KG+F
Sbjct: 215 VRDMSTRFEVLGVNGKGQF 233


>tpg|DAA55259.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea mays]
          Length = 340

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/79 (78%), Positives = 67/79 (84%)
 Frame = +1

Query: 1   KLVKAFTDHKIRKTYIALCIGLVPKWEKISIKSGHGRSKFGVWRVYAASDVGRSLPGGSN 180
           KLVKAFTDHK++KTY+ALCIG  P WEKI I SGHGRSK G WRVYA SDVGRSLPGGS 
Sbjct: 147 KLVKAFTDHKVKKTYLALCIGFPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSV 206

Query: 181 VRDMATMFEVLAVNKKGKF 237
           VRDM+T FEVL VN KG+F
Sbjct: 207 VRDMSTRFEVLGVNGKGQF 225


>gb|ACN27400.1| unknown [Zea mays]
          Length = 315

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/79 (78%), Positives = 67/79 (84%)
 Frame = +1

Query: 1   KLVKAFTDHKIRKTYIALCIGLVPKWEKISIKSGHGRSKFGVWRVYAASDVGRSLPGGSN 180
           KLVKAFTDHK++KTY+ALCIG  P WEKI I SGHGRSK G WRVYA SDVGRSLPGGS 
Sbjct: 122 KLVKAFTDHKVKKTYLALCIGFPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSV 181

Query: 181 VRDMATMFEVLAVNKKGKF 237
           VRDM+T FEVL VN KG+F
Sbjct: 182 VRDMSTRFEVLGVNGKGQF 200