BLASTX nr result

ID: Coptis21_contig00039966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039966
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...    94   1e-17
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...    94   1e-17
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...    92   3e-17
gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japo...    92   3e-17
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...    92   4e-17

>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 37/83 (44%), Positives = 62/83 (74%)
 Frame = +1

Query: 4    DFIKAIQNFFSTNKLPRGVNSTFLCLIPKVQYPEKVEEYHPIACCNIVYRCITKIIANRL 183
            D ++A+Q FFS   +P GVN T + LIPK + P++++++ PI+ CN+VY+ ++K + NRL
Sbjct: 1037 DIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRL 1096

Query: 184  KPLIEDSIAQLQTAFVPSRNIQD 252
            +P+++D ++Q Q+AFVP R I D
Sbjct: 1097 RPILDDLVSQNQSAFVPGRLITD 1119


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 37/83 (44%), Positives = 62/83 (74%)
 Frame = +1

Query: 4    DFIKAIQNFFSTNKLPRGVNSTFLCLIPKVQYPEKVEEYHPIACCNIVYRCITKIIANRL 183
            D ++A+Q FFS   +P GVN T + LIPK + P++++++ PI+ CN+VY+ ++K + NRL
Sbjct: 1002 DIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRL 1061

Query: 184  KPLIEDSIAQLQTAFVPSRNIQD 252
            +P+++D ++Q Q+AFVP R I D
Sbjct: 1062 RPILDDLVSQNQSAFVPGRLITD 1084


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 36/82 (43%), Positives = 62/82 (75%)
 Frame = +1

Query: 4   DFIKAIQNFFSTNKLPRGVNSTFLCLIPKVQYPEKVEEYHPIACCNIVYRCITKIIANRL 183
           D ++A+Q FFS+  +P GVN T + LIPK + P++++++ PI+ CN+VY+ ++K + NRL
Sbjct: 545 DIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRL 604

Query: 184 KPLIEDSIAQLQTAFVPSRNIQ 249
           +P+++D ++Q Q+AFVP  N Q
Sbjct: 605 RPILDDLVSQNQSAFVPVANDQ 626


>gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japonica Group]
          Length = 469

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 37/84 (44%), Positives = 63/84 (75%)
 Frame = +1

Query: 1   ADFIKAIQNFFSTNKLPRGVNSTFLCLIPKVQYPEKVEEYHPIACCNIVYRCITKIIANR 180
           +D ++A++ FF T  +P G+N+T + LIPKV  P +++E+ PI+ CN++Y+ ++K + NR
Sbjct: 148 SDVVRAVKEFFHTGIMPDGINATAIVLIPKVNQPMELKEFRPISLCNVIYKIVSKCLVNR 207

Query: 181 LKPLIEDSIAQLQTAFVPSRNIQD 252
           L+P+++D I+Q Q+AFVP R I D
Sbjct: 208 LRPILDDLISQNQSAFVPGRMITD 231


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 36/81 (44%), Positives = 61/81 (75%)
 Frame = +1

Query: 4   DFIKAIQNFFSTNKLPRGVNSTFLCLIPKVQYPEKVEEYHPIACCNIVYRCITKIIANRL 183
           D ++A+Q FFS+  +P GVN T + LIPK + P++++++ PI+ CN+VY+ ++K + NRL
Sbjct: 545 DIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRL 604

Query: 184 KPLIEDSIAQLQTAFVPSRNI 246
           +P+++D ++Q Q AFVP R I
Sbjct: 605 RPILDDLVSQNQRAFVPGRLI 625


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