BLASTX nr result

ID: Coptis21_contig00039944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039944
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
gb|AFK36381.1| unknown [Lotus japonicus]                              138   4e-31
ref|NP_179175.3| nodulation protein-like protein [Arabidopsis th...   138   4e-31

>ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|222850249|gb|EEE87796.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  143 bits (361), Expect = 1e-32
 Identities = 65/96 (67%), Positives = 75/96 (78%)
 Frame = +1

Query: 1   LVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFP 180
           L LR VVL+F+MVCGVYICSICLKQI     P  ++++ I +PC    +E WEIPYVH+P
Sbjct: 24  LALRMVVLVFAMVCGVYICSICLKQIGIRTNPGFLNVEVIERPCPEPNIEPWEIPYVHYP 83

Query: 181 KP*LNNRKECACNPVRYFAILSMQRSGSGWFETLLN 288
           KP   +R EC CNPVRYFAILSMQRSGSGWFETLLN
Sbjct: 84  KPITYSRVECKCNPVRYFAILSMQRSGSGWFETLLN 119


>ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|222871357|gb|EEF08488.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/96 (66%), Positives = 75/96 (78%)
 Frame = +1

Query: 1   LVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFP 180
           L LR VVL+F+MVCGVYICSICLKQI     P  ++++ I +PC    +E WEIPYVH+P
Sbjct: 14  LALRMVVLVFAMVCGVYICSICLKQIGIRTNPGFLNVEVIERPCPEPNIEPWEIPYVHYP 73

Query: 181 KP*LNNRKECACNPVRYFAILSMQRSGSGWFETLLN 288
           +P   +R EC CNPVRYFAILSMQRSGSGWFETLLN
Sbjct: 74  RPKTYSRAECKCNPVRYFAILSMQRSGSGWFETLLN 109


>ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|222835429|gb|EEE73864.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  142 bits (357), Expect = 4e-32
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = +1

Query: 1   LVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFP 180
           L+LR VV+ F+MVCGVYICSIC+KQIS     K ++I+   QPC +S +E+WE PYVH+P
Sbjct: 23  LLLRLVVVAFAMVCGVYICSICIKQISPHTTAKFLNIRIFDQPCNSSNVEEWEKPYVHYP 82

Query: 181 KP*LNNRKECACNPVRYFAILSMQRSGSGWFETLLN 288
           KP   +R+ECACNPVR+FAI SMQRSGSGWFETLLN
Sbjct: 83  KPETFSREECACNPVRFFAIFSMQRSGSGWFETLLN 118


>gb|AFK36381.1| unknown [Lotus japonicus]
          Length = 251

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/96 (66%), Positives = 74/96 (77%)
 Frame = +1

Query: 1   LVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFP 180
           LV R VVL F+MVCGVYIC+ICLKQI    K  L+DI+ I  PC    +E WEIPYVH+P
Sbjct: 23  LVWRLVVLTFAMVCGVYICTICLKQIGTSSKIGLLDIKVIQNPCPEPNIEPWEIPYVHYP 82

Query: 181 KP*LNNRKECACNPVRYFAILSMQRSGSGWFETLLN 288
            P   +R+EC+C+PVRYFAILSMQRSGSGWFET LN
Sbjct: 83  NPKTYSREECSCHPVRYFAILSMQRSGSGWFETFLN 118


>ref|NP_179175.3| nodulation protein-like protein [Arabidopsis thaliana]
           gi|40823013|gb|AAR92253.1| At2g15730 [Arabidopsis
           thaliana] gi|45752690|gb|AAS76243.1| At2g15730
           [Arabidopsis thaliana] gi|330251339|gb|AEC06433.1|
           nodulation protein-like protein [Arabidopsis thaliana]
          Length = 344

 Score =  138 bits (348), Expect = 4e-31
 Identities = 62/96 (64%), Positives = 75/96 (78%)
 Frame = +1

Query: 1   LVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFP 180
           LVLRTVVL+F MVC VYICSICLKQI        ++++   +PC    ++ W+IPYVH+P
Sbjct: 23  LVLRTVVLLFVMVCTVYICSICLKQIGVVPSAGFLNVEVFERPCPEPNIQPWDIPYVHYP 82

Query: 181 KP*LNNRKECACNPVRYFAILSMQRSGSGWFETLLN 288
           KP   +R+EC+CNPVRYFAILSMQRSGSGWFETLLN
Sbjct: 83  KPKTYSREECSCNPVRYFAILSMQRSGSGWFETLLN 118


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