BLASTX nr result

ID: Coptis21_contig00039942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039942
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
emb|CAN70295.1| hypothetical protein VITISV_035778 [Vitis vinifera]    58   9e-07
ref|XP_002278053.2| PREDICTED: uncharacterized protein LOC100264...    57   1e-06
emb|CBI37155.3| unnamed protein product [Vitis vinifera]               57   1e-06
emb|CAN72401.1| hypothetical protein VITISV_012129 [Vitis vinifera]    57   1e-06

>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/57 (54%), Positives = 40/57 (70%)
 Frame = +2

Query: 5   IPRLSVIQFLVSNGLFRKDYKVSMLLLMPEKDFLRRYVTKFEDKVPALFSVYQWKTN 175
           IPR  VIQ L S GL +KD  ++ +LL  EK FL R+VTKFE++VP L SVY+ K +
Sbjct: 340 IPRCKVIQVLWSKGLIKKDISLNTVLLPVEKRFLERFVTKFEEEVPQLLSVYEGKVD 396


>emb|CAN70295.1| hypothetical protein VITISV_035778 [Vitis vinifera]
          Length = 157

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +2

Query: 5   IPRLSVIQFLVSNGLFRKDYKVSMLLLMPEKDFLRRYVTKFEDKVPALFSVYQWKTN 175
           +PR SV++ L+  GL +KD K+   L +P  DFL +YV K+ED +P L  VYQ K +
Sbjct: 94  VPRCSVVKVLLLKGLIKKDLKLGTFLNLPVGDFLDKYVIKYEDDIPQLLDVYQGKVS 150


>ref|XP_002278053.2| PREDICTED: uncharacterized protein LOC100264327 [Vitis vinifera]
          Length = 390

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/54 (48%), Positives = 36/54 (66%)
 Frame = +2

Query: 8   PRLSVIQFLVSNGLFRKDYKVSMLLLMPEKDFLRRYVTKFEDKVPALFSVYQWK 169
           PR SV++ L   GL +KD K+   L +PE DFL +YV K++D++P L  VYQ K
Sbjct: 326 PRCSVVKVLSLKGLIKKDLKLGTFLNLPEGDFLDKYVIKYQDEIPQLLDVYQGK 379


>emb|CBI37155.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/54 (48%), Positives = 36/54 (66%)
 Frame = +2

Query: 8   PRLSVIQFLVSNGLFRKDYKVSMLLLMPEKDFLRRYVTKFEDKVPALFSVYQWK 169
           PR SV++ L   GL +KD K+   L +PE DFL +YV K++D++P L  VYQ K
Sbjct: 349 PRCSVVKVLSLKGLIKKDLKLGTFLNLPEGDFLDKYVIKYQDEIPQLLDVYQGK 402


>emb|CAN72401.1| hypothetical protein VITISV_012129 [Vitis vinifera]
          Length = 159

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/54 (48%), Positives = 36/54 (66%)
 Frame = +2

Query: 8   PRLSVIQFLVSNGLFRKDYKVSMLLLMPEKDFLRRYVTKFEDKVPALFSVYQWK 169
           PR SV++ L   GL +KD K+   L +PE DFL +YV K++D++P L  VYQ K
Sbjct: 95  PRCSVVKVLSLKGLIKKDLKLGTFLNLPEGDFLDKYVIKYQDEIPQLLDVYQGK 148


Top