BLASTX nr result

ID: Coptis21_contig00039937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039937
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519754.1| PREDICTED: kinesin-4-like [Glycine max]           102   3e-20
emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]   102   3e-20
ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]        102   4e-20
emb|CBI36904.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_003536876.1| PREDICTED: kinesin-4-like [Glycine max]            96   3e-18

>ref|XP_003519754.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 1008

 Score =  102 bits (254), Expect = 3e-20
 Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 31/132 (23%)
 Frame = +2

Query: 2   LTSLVREILSDKKPEEVPMLVEFMLTKVMEEFDHRFASHSEMT-------MLGEGNATQI 160
           L+ LVR +L DKKPEEVP+LVE +L KV+EEF+HR AS  E T       +LG G+ ++ 
Sbjct: 225 LSMLVRAVLLDKKPEEVPLLVESVLNKVVEEFEHRIASQGEQTKISRGAVLLGNGSVSKF 284

Query: 161 ---DKV---------------------DEESKTRILKQQVFFDRQKRELQELRYSLHTAK 268
              DK                      DEESK ++LK+Q+ FD+Q+R++QEL++++HT K
Sbjct: 285 VMADKKMDNKIPMVTKKERLLHKNFVDDEESKRQLLKKQMLFDQQQRDIQELKHTIHTTK 344

Query: 269 VGMQHMTTKYHE 304
            GMQ +  K+HE
Sbjct: 345 AGMQFLQMKFHE 356


>emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]
          Length = 1172

 Score =  102 bits (254), Expect = 3e-20
 Identities = 60/134 (44%), Positives = 78/134 (58%), Gaps = 33/134 (24%)
 Frame = +2

Query: 2   LTSLVREILSDKKPEEVPMLVEFMLTKVMEEFDHRFASHSEM------------------ 127
           L+ LVR IL DKKPEEVPMLVE +LTKV+EEF+HR AS +E+                  
Sbjct: 246 LSMLVRSILLDKKPEEVPMLVESVLTKVVEEFEHRIASQNELRKTPSKVLAVSNSNKSLL 305

Query: 128 ------TMLGEGNATQIDK---------VDEESKTRILKQQVFFDRQKRELQELRYSLHT 262
                 T + + N   I K          DEE K RILKQQ+ FD+Q+R++QE++++L T
Sbjct: 306 RAASSDTKIEDKNVALIKKGECFRKSFVPDEEXKGRILKQQMIFDQQQRDIQEMKHALRT 365

Query: 263 AKVGMQHMTTKYHE 304
            K GMQ M  K+HE
Sbjct: 366 TKAGMQFMQMKFHE 379


>ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1011

 Score =  102 bits (253), Expect = 4e-20
 Identities = 60/134 (44%), Positives = 78/134 (58%), Gaps = 33/134 (24%)
 Frame = +2

Query: 2   LTSLVREILSDKKPEEVPMLVEFMLTKVMEEFDHRFASHSEM------------------ 127
           L+ LVR IL DKKPEEVPMLVE +LTKV+EEF+HR AS +E+                  
Sbjct: 229 LSMLVRSILLDKKPEEVPMLVESVLTKVVEEFEHRIASQNELRKTPSKVLAVSNSNKSLL 288

Query: 128 ------TMLGEGNATQIDK---------VDEESKTRILKQQVFFDRQKRELQELRYSLHT 262
                 T + + N   I K          DEE K RILKQQ+ FD+Q+R++QE++++L T
Sbjct: 289 RAASSDTKIEDKNVALIKKGECFRKSFVPDEELKGRILKQQMIFDQQQRDIQEMKHALRT 348

Query: 263 AKVGMQHMTTKYHE 304
            K GMQ M  K+HE
Sbjct: 349 TKAGMQFMQMKFHE 362


>emb|CBI36904.3| unnamed protein product [Vitis vinifera]
          Length = 1017

 Score =  102 bits (253), Expect = 4e-20
 Identities = 60/134 (44%), Positives = 78/134 (58%), Gaps = 33/134 (24%)
 Frame = +2

Query: 2   LTSLVREILSDKKPEEVPMLVEFMLTKVMEEFDHRFASHSEM------------------ 127
           L+ LVR IL DKKPEEVPMLVE +LTKV+EEF+HR AS +E+                  
Sbjct: 229 LSMLVRSILLDKKPEEVPMLVESVLTKVVEEFEHRIASQNELRKTPSKVLAVSNSNKSLL 288

Query: 128 ------TMLGEGNATQIDK---------VDEESKTRILKQQVFFDRQKRELQELRYSLHT 262
                 T + + N   I K          DEE K RILKQQ+ FD+Q+R++QE++++L T
Sbjct: 289 RAASSDTKIEDKNVALIKKGECFRKSFVPDEELKGRILKQQMIFDQQQRDIQEMKHALRT 348

Query: 263 AKVGMQHMTTKYHE 304
            K GMQ M  K+HE
Sbjct: 349 TKAGMQFMQMKFHE 362


>ref|XP_003536876.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 1010

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 31/132 (23%)
 Frame = +2

Query: 2   LTSLVREILSDKKPEEVPMLVEFMLTKVMEEFDHRFASHSEMTMLGEGNATQ-------- 157
           L+ LVR IL DKKPEEVP+LVE +L KV+EEF+ R AS  E   +  G  +Q        
Sbjct: 225 LSMLVRAILLDKKPEEVPLLVESVLNKVVEEFEQRIASQGEQIKISRGAVSQGNGSVSKF 284

Query: 158 --IDKV---------------------DEESKTRILKQQVFFDRQKRELQELRYSLHTAK 268
              DK                      D ESK ++LKQQ+ FD Q+R++QEL++++HT K
Sbjct: 285 VMADKKMDSKIPMVTKKEGFFHKNHVDDVESKRQLLKQQMLFDNQQRDIQELKHTIHTTK 344

Query: 269 VGMQHMTTKYHE 304
            GMQ +  K+HE
Sbjct: 345 AGMQFLQMKFHE 356


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