BLASTX nr result

ID: Coptis21_contig00039911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039911
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    54   1e-09
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    54   2e-08
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    52   6e-08
ref|XP_002336067.1| predicted protein [Populus trichocarpa] gi|2...    56   1e-07
ref|XP_002331143.1| predicted protein [Populus trichocarpa] gi|2...    50   6e-07

>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 53.9 bits (128), Expect(2) = 1e-09
 Identities = 27/62 (43%), Positives = 35/62 (56%)
 Frame = -3

Query: 293 HLMGDVIPWYQSLEHTLGKLTWAQFTKALCTRFGTLEDSDPGGTLSKLHQIGTVTDYQLQ 114
           HL G  + W++ L    G LTW +FTKA+  RFG  +  DP   L++L Q  TV  YQ  
Sbjct: 123 HLEGIALQWHRWLTKFRGPLTWDEFTKAVQLRFGPTDYEDPSEALTRLKQTTTVAAYQEA 182

Query: 113 FE 108
           FE
Sbjct: 183 FE 184



 Score = 33.5 bits (75), Expect(2) = 1e-09
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = -1

Query: 106 FERLANHTRRLPEELLISYFVSGLRDEL*VGVQM 5
           FE+L++    LPE  LI  F++GL+DE+ + V++
Sbjct: 183 FEKLSHRVDGLPENFLIGCFIAGLQDEIRIDVKI 216


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 53.9 bits (128), Expect(2) = 2e-08
 Identities = 26/62 (41%), Positives = 35/62 (56%)
 Frame = -3

Query: 293 HLMGDVIPWYQSLEHTLGKLTWAQFTKALCTRFGTLEDSDPGGTLSKLHQIGTVTDYQLQ 114
           H+ G  + W+Q +E   G  +W  F +AL TRFG+    DP   L +L Q  TV DY+ Q
Sbjct: 129 HMEGKALVWFQDIEAAGGISSWEGFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQ 188

Query: 113 FE 108
           FE
Sbjct: 189 FE 190



 Score = 29.6 bits (65), Expect(2) = 2e-08
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 109 KFERLANHTRRLPEELLISYFVSGLRDEL*VGVQM 5
           +FE L+N  R L E   +S F+SGLR+ +   V+M
Sbjct: 188 QFEALSNQLRGLAESYKLSCFLSGLRENIRFMVRM 222


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 52.0 bits (123), Expect(2) = 6e-08
 Identities = 25/62 (40%), Positives = 35/62 (56%)
 Frame = -3

Query: 293 HLMGDVIPWYQSLEHTLGKLTWAQFTKALCTRFGTLEDSDPGGTLSKLHQIGTVTDYQLQ 114
           H+ G  + W+Q +E   G  +W  F +AL TRFG+    +P   L +L Q  TV DY+ Q
Sbjct: 94  HMEGKALVWFQDIEAAGGISSWEGFVRALQTRFGSSPYENPMEALIRLKQTSTVEDYKSQ 153

Query: 113 FE 108
           FE
Sbjct: 154 FE 155



 Score = 29.6 bits (65), Expect(2) = 6e-08
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 109 KFERLANHTRRLPEELLISYFVSGLRDEL 23
           +FE L+N  R L E   +S F+SGLR+++
Sbjct: 153 QFEALSNQLRGLAESYKLSCFLSGLREDI 181


>ref|XP_002336067.1| predicted protein [Populus trichocarpa] gi|222869875|gb|EEF07006.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score = 55.8 bits (133), Expect(2) = 1e-07
 Identities = 29/62 (46%), Positives = 34/62 (54%)
 Frame = -3

Query: 293 HLMGDVIPWYQSLEHTLGKLTWAQFTKALCTRFGTLEDSDPGGTLSKLHQIGTVTDYQLQ 114
           HL G  + +Y+ L+H      W  F +AL  RFG  E  DP G LSKL Q  TV  YQ Q
Sbjct: 123 HLKGATLQYYKYLQHAGELNDWVSFIQALEKRFGPTEYEDPEGELSKLRQTSTVAAYQSQ 182

Query: 113 FE 108
           FE
Sbjct: 183 FE 184



 Score = 25.0 bits (53), Expect(2) = 1e-07
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 109 KFERLANHTRRLPEELLISYFVSGLRDEL 23
           +FE LA     L +  L   F+SGL+D++
Sbjct: 182 QFENLAQRIDGLLDRFLTRTFISGLKDDI 210


>ref|XP_002331143.1| predicted protein [Populus trichocarpa] gi|222873226|gb|EEF10357.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 49.7 bits (117), Expect(2) = 6e-07
 Identities = 25/60 (41%), Positives = 35/60 (58%)
 Frame = -3

Query: 284 GDVIPWYQSLEHTLGKLTWAQFTKALCTRFGTLEDSDPGGTLSKLHQIGTVTDYQLQFEV 105
           G  + W+Q LE +    +W  FT++L TRFG     D   TL++LHQ  TV  Y+ QFE+
Sbjct: 3   GKTLTWFQDLEASSSITSWDGFTQSLLTRFGPSILDDLMETLTRLHQTTTVEVYKSQFEI 62



 Score = 28.5 bits (62), Expect(2) = 6e-07
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -1

Query: 109 KFERLANHTRRLPEELLISYFVSGLRDEL*VGVQM 5
           +FE L+N  + L E   +S F+SGLR+++   V+M
Sbjct: 59  QFEILSNQLKGLAESYKLSCFLSGLREDICFMVRM 93


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