BLASTX nr result

ID: Coptis21_contig00039902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039902
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5...    88   8e-16
emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]    88   8e-16
ref|XP_003521444.1| PREDICTED: PAN domain-containing protein At5...    82   3e-14
ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
gb|ABK95014.1| unknown [Populus trichocarpa]                           81   1e-13

>ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera]
           gi|297740069|emb|CBI30251.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/66 (57%), Positives = 52/66 (78%)
 Frame = -1

Query: 200 AQELHKGFSATPDSSSKTFEPLLTDSTNNFSLGFLRVNRSQLTLAILHLPSSEPTWFVNT 21
           +QEL KGF+ATP+ S+ +F+PLLTD T N+S+GFLRVNR+QL L++LH+PS+EP W  + 
Sbjct: 33  SQELLKGFTATPEPSTSSFQPLLTDPTGNYSMGFLRVNRTQLALSVLHVPSAEPLWQADM 92

Query: 20  TRNLEW 3
            R   W
Sbjct: 93  ARLARW 98


>emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]
          Length = 490

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/66 (57%), Positives = 52/66 (78%)
 Frame = -1

Query: 200 AQELHKGFSATPDSSSKTFEPLLTDSTNNFSLGFLRVNRSQLTLAILHLPSSEPTWFVNT 21
           +QEL KGF+ATP+ S+ +F+PLLTD T N+S+GFLRVNR+QL L++LH+PS+EP W  + 
Sbjct: 33  SQELLKGFTATPEPSTSSFQPLLTDPTGNYSMGFLRVNRTQLALSVLHVPSAEPLWQADM 92

Query: 20  TRNLEW 3
            R   W
Sbjct: 93  ARLARW 98


>ref|XP_003521444.1| PREDICTED: PAN domain-containing protein At5g03700-like [Glycine
           max]
          Length = 497

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = -1

Query: 197 QELHKGFSATPDSSSKTFEPLLTDSTNNFSLGFLRVNRSQLTLAILHLPSSEPTWFVNTT 18
           QELH GFSAT +SS+  F+ +L+D + NFSLGFLRVN++QL LA+LH+ SSEP W  N T
Sbjct: 42  QELHIGFSATAESSTTPFQAVLSDHSGNFSLGFLRVNQNQLALAVLHVASSEPFWVANPT 101

Query: 17  RNLEW 3
               W
Sbjct: 102 HAASW 106


>ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/66 (56%), Positives = 46/66 (69%)
 Frame = -1

Query: 200 AQELHKGFSATPDSSSKTFEPLLTDSTNNFSLGFLRVNRSQLTLAILHLPSSEPTWFVNT 21
           AQEL  GF A P SS  +F+ LL DST+ FSLGFLRVN++QL L ++HLPS +P W  N 
Sbjct: 33  AQELLAGFKANPSSSVSSFQSLLNDSTSTFSLGFLRVNQTQLALTVIHLPSLQPLWQANP 92

Query: 20  TRNLEW 3
           T +  W
Sbjct: 93  TSSFRW 98


>gb|ABK95014.1| unknown [Populus trichocarpa]
          Length = 487

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/66 (56%), Positives = 46/66 (69%)
 Frame = -1

Query: 200 AQELHKGFSATPDSSSKTFEPLLTDSTNNFSLGFLRVNRSQLTLAILHLPSSEPTWFVNT 21
           AQEL  GF A P SS  +F+ LL DST+ FSLGFLRVN++QL L ++HLPS +P W  N 
Sbjct: 33  AQELLAGFKANPSSSVSSFQSLLNDSTSTFSLGFLRVNQTQLALTVIHLPSLQPLWQANP 92

Query: 20  TRNLEW 3
           T +  W
Sbjct: 93  TSSFRW 98


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