BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039891
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
emb|CBI30973.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...   168   5e-40
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36

>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/126 (65%), Positives = 101/126 (80%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           +AKRVYDQMI+EG +PS LVY  LI+  CQ G+VRE+FEL+NEMV HGYFP A TFNALI
Sbjct: 527 DAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALI 586

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIV 20
           S FC QGK+ +ALKL+E+MVG+GC P +GSYSP++D LC +GDFQ+A  L   M EK I+
Sbjct: 587 SAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDIL 646

Query: 19  PDFFTW 2
           PD+ TW
Sbjct: 647 PDYSTW 652



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/122 (31%), Positives = 61/122 (50%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           +A ++   M   G  P+ ++Y T+I+ +C+ G V  +  LMNEMV     P   TFN LI
Sbjct: 251 DAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLI 306

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIV 20
           S +C +  +  AL L+E+    G  P V + + ++  LCK G       +L  +   G V
Sbjct: 307 SAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGV 366

Query: 19  PD 14
            D
Sbjct: 367 VD 368



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/126 (26%), Positives = 57/126 (45%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           +A  + ++    G +P  +    ++  +C+ G V E  E++  +   G       +N LI
Sbjct: 317 QALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLI 376

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIV 20
             FC  GK     +++++M  KGC P V +Y+ L    C  G    A  L + M   GI 
Sbjct: 377 KGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGIN 436

Query: 19  PDFFTW 2
            +F T+
Sbjct: 437 WNFMTY 442



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/116 (26%), Positives = 51/116 (43%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           E   V +++   G +   + Y TLI   C  G  +    ++ +M   G  P   T+N L 
Sbjct: 352 EGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILA 411

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAE 32
           S +C+ G +++A+ L  +M   G      +Y  LI  LC  G  +    +L  M E
Sbjct: 412 SGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEE 467


>emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/126 (65%), Positives = 101/126 (80%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           +AKRVYDQMI+EG +PS LVY  LI+  CQ G+VRE+FEL+NEMV HGYFP A TFNALI
Sbjct: 375 DAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALI 434

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIV 20
           S FC QGK+ +ALKL+E+MVG+GC P +GSYSP++D LC +GDFQ+A  L   M EK I+
Sbjct: 435 SAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDIL 494

Query: 19  PDFFTW 2
           PD+ TW
Sbjct: 495 PDYSTW 500



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/122 (31%), Positives = 61/122 (50%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           +A ++   M   G  P+ ++Y T+I+ +C+ G V  +  LMNEMV     P   TFN LI
Sbjct: 99  DAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLI 154

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIV 20
           S +C +  +  AL L+E+    G  P V + + ++  LCK G       +L  +   G V
Sbjct: 155 SAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGV 214

Query: 19  PD 14
            D
Sbjct: 215 VD 216



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/126 (26%), Positives = 57/126 (45%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           +A  + ++    G +P  +    ++  +C+ G V E  E++  +   G       +N LI
Sbjct: 165 QALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLI 224

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIV 20
             FC  GK     +++++M  KGC P V +Y+ L    C  G    A  L + M   GI 
Sbjct: 225 KGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGIN 284

Query: 19  PDFFTW 2
            +F T+
Sbjct: 285 WNFMTY 290



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/116 (26%), Positives = 51/116 (43%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           E   V +++   G +   + Y TLI   C  G  +    ++ +M   G  P   T+N L 
Sbjct: 200 EGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILA 259

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAE 32
           S +C+ G +++A+ L  +M   G      +Y  LI  LC  G  +    +L  M E
Sbjct: 260 SGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEE 315


>ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  173 bits (438), Expect = 1e-41
 Identities = 84/126 (66%), Positives = 97/126 (76%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           EAKRVYDQM  EG +PSALVY+ LI+  CQ+G VRE+ ELMNEMV  GYFPVASTFNALI
Sbjct: 448 EAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALI 507

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIV 20
           S FC  GK  +ALKL+E+MVG+GC P  GSYSPLID LC++  FQ+AA LL  M E GI 
Sbjct: 508 SGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGIT 567

Query: 19  PDFFTW 2
           PD+  W
Sbjct: 568 PDYLIW 573



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/114 (28%), Positives = 53/114 (46%)
 Frame = -3

Query: 343 GSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALISEFCNQGKINNA 164
           G +P  +    ++  +C  G V E+ E++  +   G        N LI  FC  GK+   
Sbjct: 250 GFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLG 309

Query: 163 LKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIVPDFFTW 2
             L++EM  KGC P   +Y+ LI   C+ G  + A  + + M   GI  +F T+
Sbjct: 310 HGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTF 363



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/116 (31%), Positives = 56/116 (48%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           EA  + +++  +G +   + + TLI   C+ G V+    L+ EM   G  P A T+NALI
Sbjct: 273 EAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALI 332

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAE 32
           S FC  G + +AL +  +M   G      ++  LI  L  RG  +    +L  M E
Sbjct: 333 SGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEE 388



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 31/145 (21%)
 Frame = -3

Query: 343 GSLPSALVYETLINCMCQQGDVRESFELMNEM---------------------------- 248
           G  P+ ++Y TL++ +C  G V  +  LMNE+                            
Sbjct: 184 GLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKEPNDVTFNVLICGYCKEDNFVQALVLL 243

Query: 247 ---VGHGYFPVASTFNALISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKR 77
                 G+ P   T   ++   CN G++  A++++E +  KG    V +++ LI   CK 
Sbjct: 244 EKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKF 303

Query: 76  GDFQRAAGLLSTMAEKGIVPDFFTW 2
           G  +   GLL  M  KG +P+  T+
Sbjct: 304 GKVKLGHGLLKEMERKGCLPNADTY 328


>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/125 (61%), Positives = 98/125 (78%)
 Frame = -3

Query: 376 AKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALIS 197
           AK V+DQMI EG  P+ LVY+ L++  CQ+G++RE+FELMNEMVGHGYF VAS FNALI 
Sbjct: 473 AKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIH 532

Query: 196 EFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIVP 17
            FC QGK  +ALKL+++MVG+GC P  G+YSPLID LC++G+FQ+A  + + M EKGI P
Sbjct: 533 GFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITP 592

Query: 16  DFFTW 2
           D  TW
Sbjct: 593 DSSTW 597



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/114 (30%), Positives = 55/114 (48%)
 Frame = -3

Query: 343 GSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALISEFCNQGKINNA 164
           G +P  +    ++  +C  G V E+ E++  +   G       +N L+  FC  GKI  A
Sbjct: 274 GFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVA 333

Query: 163 LKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIVPDFFTW 2
            + ++EM  KGC P V +Y+ LI   C  G F  A  + + M   GI  +F T+
Sbjct: 334 HRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTY 387



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/116 (28%), Positives = 53/116 (45%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           EA  + +++  +G L   + Y TL+   C+ G ++ +   + EM   G  P   T+N LI
Sbjct: 297 EAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILI 356

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAE 32
           S FC+ G  + AL +  +M   G      +Y  LI  L   G  +    +L  M E
Sbjct: 357 SGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEE 412



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/118 (23%), Positives = 60/118 (50%)
 Frame = -3

Query: 355 MIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALISEFCNQGK 176
           +++E   P+ + +  LI   C++ ++ ++  L+ +    G+ P   T   ++   CN G+
Sbjct: 235 LMDEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGR 294

Query: 175 INNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIVPDFFTW 2
           +  A++++E +  KG    V +Y+ L+   C+ G  + A   L  M  KG +P+  T+
Sbjct: 295 VTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETY 352


>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  156 bits (395), Expect = 1e-36
 Identities = 69/126 (54%), Positives = 94/126 (74%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           +AKRVYDQMI+EG +PS LVY  L++   +QG+VRE+ ELMNEM+ +  FP+ STFNA+I
Sbjct: 469 DAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVI 528

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIV 20
           + FC QGK+ +ALKL+E++  +GC P   +YSPLID LC+ GD Q+A  +   M +KGI+
Sbjct: 529 TGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGIL 588

Query: 19  PDFFTW 2
           PD F W
Sbjct: 589 PDLFIW 594



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/106 (35%), Positives = 55/106 (51%)
 Frame = -3

Query: 343 GSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALISEFCNQGKINNA 164
           G  P+ +VY TL++ +C+ G V  +  LMNEM      P   TFN LIS +C +G    A
Sbjct: 205 GVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQA 260

Query: 163 LKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKG 26
           L L+E+    G  P V S + +++ LC  G    AA +L  +   G
Sbjct: 261 LVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMG 306



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/126 (26%), Positives = 57/126 (45%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           +A  + ++    G +P  +    ++  +C  G   E+ E++  +   G       +N LI
Sbjct: 259 QALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLI 318

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGIV 20
             FC  GK+   L  +++M  KGC P V +Y+ LI    + G    A  L + M   GI 
Sbjct: 319 KGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIK 378

Query: 19  PDFFTW 2
            +F T+
Sbjct: 379 WNFVTF 384



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/116 (30%), Positives = 50/116 (43%)
 Frame = -3

Query: 379 EAKRVYDQMIEEGSLPSALVYETLINCMCQQGDVRESFELMNEMVGHGYFPVASTFNALI 200
           EA  V +++   G L   + Y TLI   C  G V+     + +M   G  P   T+N LI
Sbjct: 294 EAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLI 353

Query: 199 SEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAE 32
           S F   G ++ AL L  +M   G K    ++  LI  LC     +    +L  M E
Sbjct: 354 SGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEE 409