BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039886
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18599.3| unnamed protein product [Vitis vinifera]              174   9e-42
ref|XP_002269205.1| PREDICTED: nuclease S1 [Vitis vinifera]           174   9e-42
gb|AFK39715.1| unknown [Lotus japonicus]                              171   4e-41
pdb|4DJ4|A Chain A, X-ray Structure Of Mutant N211d Of Bifunctio...   169   2e-40
pdb|3SNG|A Chain A, X-ray Structure Of Fully Glycosylated Bifunc...   169   2e-40

>emb|CBI18599.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  174 bits (440), Expect = 9e-42
 Identities = 75/85 (88%), Positives = 82/85 (96%)
 Frame = -2

Query: 256 SLCTWPDQIRHWYKYQWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIRNFTSQ 77
           +LCTWPDQIRHWYKY+WTSSLHFIDTPD+ACTFDYSRDCHD HG +DMCVAGAI+NFTSQ
Sbjct: 46  ALCTWPDQIRHWYKYRWTSSLHFIDTPDEACTFDYSRDCHDPHGLQDMCVAGAIKNFTSQ 105

Query: 76  LSHYKEGSSDRRHNMTEALLFLSHF 2
           LSHY EGSSDRR+N+TEALLFLSHF
Sbjct: 106 LSHYGEGSSDRRYNLTEALLFLSHF 130


>ref|XP_002269205.1| PREDICTED: nuclease S1 [Vitis vinifera]
          Length = 307

 Score =  174 bits (440), Expect = 9e-42
 Identities = 75/85 (88%), Positives = 82/85 (96%)
 Frame = -2

Query: 256 SLCTWPDQIRHWYKYQWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIRNFTSQ 77
           +LCTWPDQIRHWYKY+WTSSLHFIDTPD+ACTFDYSRDCHD HG +DMCVAGAI+NFTSQ
Sbjct: 70  ALCTWPDQIRHWYKYRWTSSLHFIDTPDEACTFDYSRDCHDPHGLQDMCVAGAIKNFTSQ 129

Query: 76  LSHYKEGSSDRRHNMTEALLFLSHF 2
           LSHY EGSSDRR+N+TEALLFLSHF
Sbjct: 130 LSHYGEGSSDRRYNLTEALLFLSHF 154


>gb|AFK39715.1| unknown [Lotus japonicus]
          Length = 308

 Score =  171 bits (434), Expect = 4e-41
 Identities = 75/85 (88%), Positives = 80/85 (94%)
 Frame = -2

Query: 256 SLCTWPDQIRHWYKYQWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIRNFTSQ 77
           +LCTWPDQIRHWYKY+WTS LHFIDTPD ACTFDYSRDCHD  G KDMCVAGAI+NFTSQ
Sbjct: 70  ALCTWPDQIRHWYKYRWTSPLHFIDTPDDACTFDYSRDCHDPKGVKDMCVAGAIKNFTSQ 129

Query: 76  LSHYKEGSSDRRHNMTEALLFLSHF 2
           LSHYKEG+SDRR+NMTEALLFLSHF
Sbjct: 130 LSHYKEGTSDRRYNMTEALLFLSHF 154


>pdb|4DJ4|A Chain A, X-ray Structure Of Mutant N211d Of Bifunctional Nuclease
           Tbn1 From Solanum Lycopersicum (tomato)
           gi|411024282|pdb|4DJ4|B Chain B, X-ray Structure Of
           Mutant N211d Of Bifunctional Nuclease Tbn1 From Solanum
           Lycopersicum (tomato)
          Length = 277

 Score =  169 bits (428), Expect = 2e-40
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 SLCTWPDQIRHWYKYQWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIRNFTSQ 77
           +LC WPDQ+RHWYKY+WTS LHFIDTPDKAC FDY RDCHD HG KDMCVAGAI+NFT+Q
Sbjct: 39  ALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQ 98

Query: 76  LSHYKEGSSDRRHNMTEALLFLSHF 2
           LSHY+EG+SDRR+NMTEALLFLSHF
Sbjct: 99  LSHYREGTSDRRYNMTEALLFLSHF 123


>pdb|3SNG|A Chain A, X-ray Structure Of Fully Glycosylated Bifunctional
           Nuclease Tbn1 From Solanum Lycopersicum (tomato)
          Length = 277

 Score =  169 bits (428), Expect = 2e-40
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 SLCTWPDQIRHWYKYQWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIRNFTSQ 77
           +LC WPDQ+RHWYKY+WTS LHFIDTPDKAC FDY RDCHD HG KDMCVAGAI+NFT+Q
Sbjct: 39  ALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQ 98

Query: 76  LSHYKEGSSDRRHNMTEALLFLSHF 2
           LSHY+EG+SDRR+NMTEALLFLSHF
Sbjct: 99  LSHYREGTSDRRYNMTEALLFLSHF 123