BLASTX nr result

ID: Coptis21_contig00039871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039871
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593131.1| hypothetical protein MTR_2g008130 [Medicago ...    82   5e-14
ref|XP_003547071.1| PREDICTED: uncharacterized protein LOC547549...    78   9e-13
ref|XP_002523767.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
gb|AEJ72552.1| hypothetical protein [Malus x domestica]                69   5e-10
ref|XP_002321383.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>ref|XP_003593131.1| hypothetical protein MTR_2g008130 [Medicago truncatula]
           gi|355482179|gb|AES63382.1| hypothetical protein
           MTR_2g008130 [Medicago truncatula]
          Length = 420

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
 Frame = -3

Query: 331 HVCGSQIS--SNRNKIQTLDSQWRIVIICNSCLKNVKTARVCSYCFKEMEDVSISCRVCS 158
           H CG +I   + +NK+QTL S+WR+V++C  C   VK++++CSYCF E    S+ C  C 
Sbjct: 42  HACGFKIDVCTGKNKLQTLYSEWRVVLLCKKCFSCVKSSQICSYCFSESSSDSLRCVKCK 101

Query: 157 CRVHQECVLMFGRLNMYP------NMDSFRCIDCWIPR 62
             VH+ C L     N+ P        +   C+DCW+P+
Sbjct: 102 HSVHKNCFLK--NKNVAPWSYSCVGSEFSVCVDCWVPK 137


>ref|XP_003547071.1| PREDICTED: uncharacterized protein LOC547549 [Glycine max]
          Length = 831

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
 Frame = -3

Query: 331 HVCGSQIS--SNRNKIQTLDSQWRIVIICNSCLKNVKTARVCSYCFKEMEDVSISCRVCS 158
           H CG ++   + +N+++TL S+WR+V++C  C  +V+++++CSYCF      S  C  C 
Sbjct: 40  HACGFKVDVCTGKNRLRTLYSEWRVVLLCKKCFSSVESSQICSYCFSGASPESFRCNQCL 99

Query: 157 CRVHQECVLMFGRLNMYP----NMDSFRCIDCWIPRTL 56
             VH+ C L +     +       +   C+DCWIP+ L
Sbjct: 100 HSVHKSCFLKYKNAAPWSYACLGSEFSVCVDCWIPKHL 137


>ref|XP_002523767.1| conserved hypothetical protein [Ricinus communis]
           gi|223536979|gb|EEF38616.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 488

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
 Frame = -3

Query: 322 GSQISSNRNKIQTLDSQWRIVIICNSCLKNVKTARVCSYCFKEMEDVSISC--RVCSCR- 152
           G    S+  ++QTL S+WRIV++C  C   V++  +C+YCFK++     SC  R   C+ 
Sbjct: 48  GKNNDSSSGRLQTLYSEWRIVLLCKICFFRVESCHICAYCFKDLSSSDNSCLFRCPQCKR 107

Query: 151 -VHQECVLMFGRLNMYPNMDSFR-CIDCWIPRTL 56
            +H+ C   +     +     F  C+DCW+P+++
Sbjct: 108 IIHRTCFSNYSNFAPWSFSSKFSVCVDCWVPKSI 141


>gb|AEJ72552.1| hypothetical protein [Malus x domestica]
          Length = 588

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 12/104 (11%)
 Frame = -3

Query: 331 HVCGSQI----SSNRNKIQTLDSQWRIVIICNSCLKNVKTARVCSYCF---KEMEDVSIS 173
           H C  ++    +S ++K+Q L S+WR+V++C  CL  V+++ +CSYCF      ++ S +
Sbjct: 25  HCCHLRVDIANASAKSKLQILYSEWRVVLLCKKCLTRVESSELCSYCFAATSPSQEDSFT 84

Query: 172 CRVCSCRVHQECVLMFGRL-----NMYPNMDSFRCIDCWIPRTL 56
           C  C+ RVH+ C   +  +     N    +++  C DCW+P +L
Sbjct: 85  CCQCNRRVHRRCDSEYRGIALLSQNSCLAVEAEVCADCWLPESL 128


>ref|XP_002321383.1| predicted protein [Populus trichocarpa] gi|222868379|gb|EEF05510.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
 Frame = -3

Query: 325 CGSQISSNRNKIQTLDSQWRIVIICNSCLKNVKTARVCSYCFKEMEDVSISCRVCSCR-- 152
           CG +  S++ +++ L S+WRI+++C  C   V+++++CSYCF++    +   R C C+  
Sbjct: 120 CGLRTPSHK-RLEILYSEWRIILLCTKCFNLVESSKICSYCFRKFSVKTKCLRCCQCKRV 178

Query: 151 VHQECVLMFGRL-----NMYPNMDSFR-CIDCWIPRTL 56
           VH+ C      +     + Y +   F  CIDCW+P+++
Sbjct: 179 VHKSCFAKRKNVAPWSYSCYGDSGGFSVCIDCWVPKSV 216


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