BLASTX nr result
ID: Coptis21_contig00039870
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039870 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays] 102 2e-20 ref|NP_201453.1| pentatricopeptide repeat-containing protein [Ar... 102 3e-20 ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S... 101 7e-20 ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2... 101 7e-20 ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi... 100 9e-20 >gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays] Length = 694 Score = 102 bits (255), Expect = 2e-20 Identities = 44/82 (53%), Positives = 63/82 (76%) Frame = -1 Query: 267 EEGKKFYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALLS 88 EEG++ + SM RDY I P ++H+GCMVDL GRAGL++EA+ FI +MP+EP IW ALLS Sbjct: 440 EEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499 Query: 87 SCRIYKNLDLGEKAAIEALVLN 22 SC +++N+ +GE+A + + LN Sbjct: 500 SCAVHRNVGIGEEALKQIISLN 521 >ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520 gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana] gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 620 Score = 102 bits (254), Expect = 3e-20 Identities = 43/73 (58%), Positives = 59/73 (80%) Frame = -1 Query: 267 EEGKKFYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALLS 88 EEGK + SM+RDYN+ P ++H+GC+VDL GRAGLL+EA FI+ MP++P IW ALL Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424 Query: 87 SCRIYKNLDLGEK 49 +CRI+KN++LGE+ Sbjct: 425 ACRIHKNIELGEE 437 >ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor] gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor] Length = 693 Score = 101 bits (251), Expect = 7e-20 Identities = 43/82 (52%), Positives = 63/82 (76%) Frame = -1 Query: 267 EEGKKFYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALLS 88 EEG++ + SM +DY I P +H+GC+VDL GRAGL++EA+ FI +MP+EP IW ALLS Sbjct: 439 EEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS 498 Query: 87 SCRIYKNLDLGEKAAIEALVLN 22 SC ++KN+++GE+A + + LN Sbjct: 499 SCAVHKNVEIGEEALKQIVSLN 520 >ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa] Length = 514 Score = 101 bits (251), Expect = 7e-20 Identities = 40/74 (54%), Positives = 59/74 (79%) Frame = -1 Query: 267 EEGKKFYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALLS 88 +EG++F+ SM DY + P+++H+GC+VDL+ RAGLLEEAH FI SMP++P +W ALL Sbjct: 260 DEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLG 319 Query: 87 SCRIYKNLDLGEKA 46 C+++KN+DL E+A Sbjct: 320 GCKVHKNIDLAEEA 333 >ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070 [Vitis vinifera] Length = 698 Score = 100 bits (250), Expect = 9e-20 Identities = 38/81 (46%), Positives = 65/81 (80%) Frame = -1 Query: 267 EEGKKFYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALLS 88 +EG+ ++SM RD+ I+P ++H+GCMVD+ GRAGL+EEA FI++MP++P IW LL+ Sbjct: 444 DEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLA 503 Query: 87 SCRIYKNLDLGEKAAIEALVL 25 SC+++KN+++GE++ + ++L Sbjct: 504 SCKVHKNVEIGEESLKQLIIL 524